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Add HDBSCAN from HorseML.jl #273

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Add HDBSCAN from HorseML.jl #273

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Commits on Mar 22, 2024

  1. [add function or file]add hdbscan 

    make PR
    @MommaWatasu
    MommaWatasu committed Mar 22, 2024
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Commits on Mar 23, 2024

  1. [test]add test for hdbscan 

    there was no test for it
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  2. [fix]change Int64 to Int 

    test failed on a ubuntu-latest-x86
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  3. [fix]change all Int64 into Int 

    tests still fails on ubuntu-latest-x86
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  4. [change]change usage and remove extra code 

    there were functions for Xmeans
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  5. [test]update test 

    deleted some utility functions
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  6. [docs]add docs for HDBSCAN 

    Documentation workflow failed due to the docs for it
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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  7. [fix]export HdbscanCluster 

    I forgot to export it
    @MommaWatasu
    MommaWatasu committed Mar 23, 2024
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Commits on Apr 14, 2024

  1. [docs]merge docs of HDBSCAN with DBSCAN.md 

    there is no need to create new file
    @MommaWatasu
    MommaWatasu committed Apr 14, 2024
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Commits on Apr 15, 2024

  1. [clean]refactoring HDBSCANGraph 

    add comment and alias
    @MommaWatasu
    MommaWatasu committed Apr 15, 2024
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Commits on Apr 26, 2024

  1. [docs]fix docs 

    hdbscan.md remains
    @MommaWatasu
    MommaWatasu committed Apr 26, 2024
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  2. [clean]refactoring 

    the progress is temporary
    @MommaWatasu
    MommaWatasu committed Apr 26, 2024
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Commits on Apr 27, 2024

  1. [clean]refactoring 

    add comment and improve performance, etc.
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  2. [test]update test 

    changes sugges alyst
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  3. [fix]change isnothing into === 

    error occured with Julia1.10
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  4. [fix]remove println 

    forgot to remove debugging code
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  5. [docs]update docs 

    add description for detail
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  6. [docs]fix docs 

    fix links
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  7. [fix]fix docstring 

    add space
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  8. [fix]add isnoise to the list of exprted function 

    make isnoise available for user
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  9. core_distances() tweaks

    @alyst
    alyst authored Apr 27, 2024
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  10. Hdbscan: simplify results generation

    @alyst
    alyst authored Apr 27, 2024
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  11. remove heappush!: unused

    @alyst
    alyst committed Apr 27, 2024
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  12. hdbscan test: small tweaks

    @alyst
    alyst committed Apr 27, 2024
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  13. fixup hdbscan assignments

    @alyst
    alyst committed Apr 27, 2024
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  14. hdbscan: further opt core_dists 

    we don't really need a function, this is one line operation
    @alyst
    alyst committed Apr 27, 2024
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  15. hdbscan: optimize edges generation

    @alyst
    alyst committed Apr 27, 2024
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  16. HDBSCANGraph -> HdbscanGraph 

    for consistency
    @alyst
    alyst committed Apr 27, 2024
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  17. HdbscanEdge

    @alyst
    alyst committed Apr 27, 2024
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  18. HdbscanGraph: rename edges to adj_edges 

    and remove Base.getindex()
    @alyst
    alyst committed Apr 27, 2024
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  19. MSTEdge remove no-op expand() method

    @alyst
    alyst committed Apr 27, 2024
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  20. refactor HdbscanMSTEdge

    @alyst
    alyst committed Apr 27, 2024
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  21. hdbscan: fix graph vertices, remove add_edges! 

    add_edges!() is used only once
    @alyst
    alyst committed Apr 27, 2024
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  22. hdbscan_minspantree(): refactor

    @alyst
    alyst committed Apr 27, 2024
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  23. prune_clusters!(): cleanup

    @alyst
    alyst committed Apr 27, 2024
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  24. hdbscan: fix 1.0 compat 

    replace eachcol with alternatives
    @alyst
    alyst committed Apr 27, 2024
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  25. [docs]fix docstring 

    add newline
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  26. [clean]rename and refactoring 

    cleanup UnionFind terminology and move it to the other file
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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  27. [test]add test for unionfind 

    there wes no test for it
    @MommaWatasu
    MommaWatasu committed Apr 27, 2024
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Commits on Apr 28, 2024

  1. hdbscan_minspantree: fix edges sorting

    @alyst
    alyst committed Apr 28, 2024
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  2. hdbscan_clusters(): fix cost type

    @alyst
    alyst committed Apr 28, 2024
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  3. hdbscan_clusters: improve MST iteration

    @alyst
    alyst committed Apr 28, 2024
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Commits on Apr 29, 2024

  1. Merge branch 'master' of https://github.com/MommaWatasu/Clustering.jl

    @MommaWatasu
    MommaWatasu committed Apr 29, 2024
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Commits on May 1, 2024

  1. [clean]rename the result structure 

    rename HdbscanCluster into HdbscanNode and create new one to expose to the user
    @MommaWatasu
    MommaWatasu committed May 1, 2024
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Commits on May 2, 2024

  1. [hotfix]apply hot fix 

    the algorithm went wrong
    @MommaWatasu
    MommaWatasu committed May 2, 2024
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  2. [test]add test about min_size 

    ensure that `min_size` effects properly
    @MommaWatasu
    MommaWatasu committed May 2, 2024
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  3. [add function or file]support ClusteringResult 

    add counts field into HdbscanResult
    @MommaWatasu
    MommaWatasu committed May 2, 2024
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