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CSpine Position annotation

screenshot

  1. click full image sagittal and coronal to find the best zoom
  2. click the zoom window to set points, follow along with the left guide image
  • right click to go back and redo
  1. click save

The save button will create a file like {imgbase}_cspine-{user}_create-{timestamp}.tsv

# timestamp=2024-10-05 13:59:57.119815; input=mprage.nii.gz; user=foranw; sag=96; cor=119;crop=(90, 255); zoom=3;
label   x       y       sag_i   timestamp       user
C2p     114     219     96      2024-10-05 13:59:28.582055      foranw
C2m     121     219     96      2024-10-05 13:59:29.987715      foranw
C2a     128     223     96      2024-10-05 13:59:31.499080      foranw
C3up    114     226     96      2024-10-05 13:59:33.070530      foranw
⁞

All placements are recoded in cspine.db. See schema.txt.

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