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Yujie Zhang committed Sep 2, 2020
1 parent 9b6635f commit 74d9d99
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion glycompare/pipeline_functions.py
Original file line number Diff line number Diff line change
Expand Up @@ -467,7 +467,7 @@ def glycoprofile_pip(keywords_dict, abd_table, unique_glycan_identifier_to_struc
def compositional_data(keywords_dict, protein_sites, reference_vector = None, forced = True):
abundance_table = keywords_dict['abundance_table_addr']
if not os.path.isfile(abundance_table):
assert False, "cannot find motif abundance table"
assert False, "cannot find glycan abundance table"
var_annot = keywords_dict['variable_annotation_addr']
if not os.path.isfile(var_annot):
assert False, "cannot find variable annotation file"
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