Merge pull request #1455 from Libensemble/dependabot/pip/develop/pyte…

…st-cov-6.0.0

Bump pytest-cov from 5.0.0 to 6.0.0

.github/workflows/basic.yml

@@ -63,10 +63,11 @@ jobs:
             channel-priority: flexible
             auto-update-conda: true
 
-        - name: Force-update certifi
+        - name: Force-update certifi and pip
           run: |
             python --version
-            pip install -I --upgrade certifi
+            python -m pip install --upgrade pip
+            python -m pip install -I --upgrade certifi
 
         - name: Install Ubuntu compilers
           if: matrix.os == 'ubuntu-latest'
@@ -83,18 +84,13 @@ jobs:
             pip install -r install/testing_requirements.txt
             pip install -r install/misc_feature_requirements.txt
             source install/install_ibcdfo.sh
+            conda install numpy scipy
 
         - name: Install mpi4py and MPI from conda
           run: |
             conda install mpi4py ${{ matrix.mpi-version }}
 
-        - name: Install generator dependencies
-          run: |
-            python -m pip install --upgrade pip
-            pip install mpmath matplotlib
-            conda install numpy nlopt scipy
-
-        - name: Install libEnsemble, flake8
+        - name: Install libEnsemble, test flake8
           run: |
             pip install pydantic==${{ matrix.pydantic-version }}
             pip install -e .

docs/introduction_latex.rst

@@ -8,7 +8,6 @@
 .. _Conda: https://docs.conda.io/en/latest/
 .. _conda-forge: https://conda-forge.org/
 .. _Contributions: https://github.com/Libensemble/libensemble/blob/main/CONTRIBUTING.rst
-.. _Coveralls: https://coveralls.io/github/Libensemble/libensemble?branch=main
 .. _DEAP: https://deap.readthedocs.io/en/master/overview.html
 .. _DFO-LS: https://github.com/numericalalgorithmsgroup/dfols
 .. _ECNoise: https://www.mcs.anl.gov/~wild/cnoise/

install/testing_requirements.txt

@@ -1,11 +1,12 @@
 flake8==7.1.1
-coverage==7.3.1
+coverage>=7.5
 pytest==8.3.3
-pytest-cov==5.0.0
+pytest-cov==6.0.0
 pytest-timeout==2.3.1
 mock==5.1.0
 python-dateutil==2.9.0.post0
 anyio==4.6.2.post1
 matplotlib==3.9.2
 mpmath==1.3.0
 rich==13.9.4
+nlopt==2.8.0