Popular repositories Loading

1. bindash bindash Public

   Forked from jianshu93/bindash

   Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop

   C++

2. dashing dashing Public

   Forked from dnbaker/dashing

   Fast and accurate genomic distances using HyperLogLog

   C++

3. Mash Mash Public

   Forked from marbl/Mash

   Fast genome and metagenome distance estimation using MinHash

   C++

4. sketch sketch Public

   Forked from dnbaker/sketch

   C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings

   C++

5. dashing2 dashing2 Public

   Forked from dnbaker/dashing2

   Dashing 2 is a fast toolkit for k-mer and minimizer encoding, sketching, comparison, and indexing.

   C++

6. miniphy miniphy Public

   Forked from karel-brinda/MiniPhy

   Phylogenetic compression of extremely large genome collections [661k ↘𝟭𝟲𝗚𝗶𝗕 | BIGSIdata ↘𝟰𝟴𝗚𝗶𝗕 | AllTheBact'23 ↘𝟳𝟱𝗚𝗶𝗕]

   Python