tests for converted functions bar mesh conversion

mesh conversion will be tested indirectly by other tests- come back later for additional test

lyceanem/geometry/test_geometry.py

@@ -0,0 +1,47 @@
+import pytest
+import numpy as np
+import meshio
+from . import geometry_functions_meshio as GF
+def are_meshes_equal(mesh1, mesh2, rtol=1e-5):
+    # Check vertices
+    assert np.allclose(mesh1.points, mesh2.points, rtol=rtol)
+
+
+    # Check cells
+    if len(mesh1.cells) >0:
+
+        assert np.allclose(mesh1.cells[0].data, mesh2.cells[0].data)
+
+    for i in mesh1.point_data:
+        assert np.allclose(mesh1.point_data[i], mesh2.point_data[i])
+
+    for i in mesh1.cell_data:
+        assert np.allclose(mesh1.cell_data[i], mesh2.cell_data[i])
+
+
+    return True
+
+def test_tri_areas():
+    refrence = np.load('areas.npy')
+    input = meshio.read('receive_horn.ply')
+    result = GF.tri_areas(input)
+    assert np.allclose(result, refrence)
+
+def test_tri_centroids():
+    refrence = np.load('centroid_numpy.npy')
+    refrenece_mesh = meshio.read('centroid_mesh.ply')
+    input = meshio.read('receive_horn.ply')
+    result_numpy, result_mesh = GF.tri_centroids(input)
+    assert np.allclose(result_numpy, refrence)
+    assert are_meshes_equal(result_mesh, refrenece_mesh)
+def test_mesh_rotate():
+    refrence = meshio.read('rotated_recieve.ply')
+    input = meshio.read('receive_horn.ply')
+    rotation_vector1 = np.radians(np.asarray([90.0, 0.0, 0.0]))
+    centre = np.array([1.0, 1.0, 1.0])
+
+
+    result = GF.mesh_rotate(input, rotation_vector1, centre)
+
+    assert are_meshes_equal(result, refrence)
+