v0.5.0 -> v0.5.1 (bugfix)

MICS-Lab · Apr 20, 2023 · 7a1722a · 7a1722a
1 parent 47a9e96
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Showing 6 changed files with 86 additions and 57 deletions.
diff --git a/CITATION.cff b/CITATION.cff
@@ -1,7 +1,7 @@
 cff-version: 1.2.0
 message: "If you use this software, please cite it as below.
           Lhotte, R., Clichet, V., Usureau, C. & Taupin, J. (2022). Python Eplet Load Calculator (PELC) package
-          (Version 0.5.0) [Computer software]. https://doi.org/10.5281/zenodo.7254809"
+          (Version 0.5.1) [Computer software]. https://doi.org/10.5281/zenodo.7254809"
 authors:
   - family-names: Lhotte
     given-names: Romain
@@ -16,7 +16,7 @@ authors:
     given-names: Jean-Luc
     orcid: https://orcid.org/0000-0002-5766-046X
 title: Python Eplet Load Calculator (PELC) package
-version: 0.5.0
+version: 0.5.1
 doi: doi.org/10.5281/zenodo.7254809
 link: https://github.com/MICS-Lab/pecc
 date-released: 2022-10-26
diff --git a/README.md b/README.md
@@ -172,7 +172,7 @@ If you use this software, please cite it as below.
 If you use this software, please cite it as below. 
 
 Lhotte, R., Clichet, V., Usureau, C. & Taupin, J. (2022). 
-Python Eplet Load Calculator (PELC) package (Version 0.5.0) [Computer software].
+Python Eplet Load Calculator (PELC) package (Version 0.5.1) [Computer software].
 https://doi.org/10.5281/zenodo.7254809
 ```
 
@@ -187,7 +187,7 @@ https://doi.org/10.5281/zenodo.7254809
   month        = oct,
   year         = 2022,
   publisher    = {Zenodo},
-  version      = {0.5.0},
+  version      = {0.5.1},
   doi          = {10.5281/zenodo.7526198},
 }
 ```
diff --git a/pelc/_input_sanity_check.py b/pelc/_input_sanity_check.py
@@ -39,7 +39,9 @@ def _equal_amount_of_unknown_alleles(
             locus_recipient_1: str = f"{locus}1_R"
             locus_recipient_2: str = f"{locus}2_R"
 
-            if allele in [row_d[locus_donor_1], row_d[locus_donor_2]]:
+            if allele in [row_r[locus_recipient_1], row_d[locus_donor_1]]:
+                # If the (first, otherwise it can be an homozygote) allele is unknown, then the other one must be
+                # unknown too and the same for the other individual
                 if not (
                     allele
                     ==

diff --git a/poetry.lock b/poetry.lock
diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pelc"
-version = "0.5.0"
+version = "0.5.1"
 description = "Python Eplet Load Calculator"
 authors = ["JasonMendoza2008 <[email protected]>"]
 readme = "README.md"
@@ -12,6 +12,7 @@ packages = [
 python = "^3.10"
 pandas = "^1.5.1"
 openpyxl = "^3.0.10"
+pandas-stubs = "^2.0.0.230412"
 
 [tool.poetry.dev-dependencies]
 pytest = "^7.2.0"

diff --git a/tests/test_pelc.py b/tests/test_pelc.py
@@ -2,4 +2,4 @@
 
 
 def test_version():
-    assert __version__ == '0.5.0'
+    assert __version__ == '0.5.1'