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dHCP pipeline

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@amakropoulos amakropoulos released this 02 Jun 10:47
· 68 commits to master since this release
e02d933

Features:

  • dHCP pipeline improvements as described in [1]:
    • multi-channel registration
    • modelling of hyper and hypo-intensities.

Hotfixes / Code improvements:

  • automatic building of N4 tool
  • automatic download of atlases
  • installation of pipeline as MIRTK tool

References:

  1. A. Makropoulos, E. C. Robinson et al. "The Developing Human Connectome Project: a Minimal Processing Pipeline for Neonatal Cortical Surface Reconstruction", NeuroImage, 2018