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Convert Orion and Hera modulefiles to LUA format and hpc-stack #648

Merged
merged 23 commits into from
Feb 15, 2022
Merged

Convert Orion and Hera modulefiles to LUA format and hpc-stack #648

merged 23 commits into from
Feb 15, 2022

Commits on Feb 8, 2022

  1. Rename Orion modulefiles for LUA format 

    - add the ".lua" extension to the Orion modulefiles

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 8, 2022
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Commits on Feb 9, 2022

  1. Remove uneeded modulefiles for Orion/WCOSS-Dell 

    - cleaned out modulefiles that are no longer needed for OznMon/Radmon
- remove errant workflow_utils.orion.lua (wrong branch)

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  2. Update Orion modulefiles to LUA format and hpc-stack 

    Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  3. Add myFC variable to WCOSS2 modulefiles 

    - add "setenv("myFC","ftn")" to the modulefiles for fbwndgfs
and storm_reloc on WCOSS2
- needed to set FC on WCOSS2 now that other platforms have
to set FC differently (e.g. mpiifort on Orion)

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  4. Update fbwndgfs and storm_reloc builds to use myFC 

    - update fbwndgfs makefile.GENERIC to use myFC variable
- update build_tropcy_NEMS.sh to use myFC variable
- also update build_tropcy_NEMS.sh to adjust JASPER_LIB variable
and remove wcoss2 check for setting SIGIO_LIB4 and SIGIO_INC4

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  5. Cleanup machine-setup.sh 

    - cleanup Orion, Hera, and Jet blocks to just set target and
do a module purge
- add $target.ver sourcing after build.ver sourcing

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  6. Update gfs_bufrsnd build for hpc-stack 

    - update the gfs_bufr build and makefile to use hpc-stack library variables

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  7. Update machine-setup.sh target version sourcing 

    - wrap $target.ver sourcing in block that checks if user is not on
WCOSS2 and source if so
- do not need or have wcoss2.ver file at this time

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  8. Update NETCDF_LDFLAGS_F in gaussian_sfcanl build 

    - adjust NETCDF_LDFLAGS_F flags in gaussian_sfcanl.fd/makefile.sh
to flip -lnetcdf/-lnetcdff order, add -lhdf5_hl flag, and add -lz flag

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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  9. Add $target.ver sourcing for Orion/Hera to load_fv3gfs_modules.sh 

    - need to now source the target-specific version files before
loading modulebase.$target.lua on Hera and Orion

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 9, 2022
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Commits on Feb 10, 2022

  1. Update build_regrid_nemsio.sh with NETCDF_LDFLAGS 

    - add NETCDF_LDFLAGS flags to successfully build regrid_nemsio

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 10, 2022
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  2. Rename Hera modulefiles to add .lua extension 

    Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 10, 2022
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  3. Create new $target.ver files for Hera and Orion 

    - under the versions folder create new hera.ver and orion.ver
- new target-specific version files will be used to set hpc-stack
modules and versions, as well potentially override other versions
as needed on the specific platforms

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 10, 2022
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  4. Remove unneeded modulefile.grib_util.hera.lua 

    Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 10, 2022
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  5. Convert Hera modulefiles to LUA format and hpc-stack 

    - convert the contents of the newly renamed Hera modules to use LUA format
- convert Hera modulefiles to load hpc-stack modules

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 10, 2022
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Commits on Feb 11, 2022

  1. Remove unneeded module loads from enkf_chgres_recenter build 

    - remove hdf5 and netcdf module loads from enkf_chgres_recenter modulefiles
- reran builds to confirm

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 11, 2022
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  2. Remove unneeded modules from fbwndgfs build 

    - remove nemsio and sigio modules from gfs_fbwndgfs build
- reran builds to confirm

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 11, 2022
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  3. Add HPSS module load back into Hera module_base 

    - was erroneously removed, added back into module_base.hera.lua
- added companion hpss_ver to hera.ver

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 11, 2022
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  4. Create wcoss2.ver 

    - create empty wcoss2.ver to go alongside other new machine-specific
version files
- update machine-setup.sh to load $target.ver on all machines now

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 11, 2022
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  5. Update SIGIO library variables in build_tropcy_NEMS.sh 

    - replace SIGIO_LIB4 with SIGIO_LIB
- replace SIGIO_INC4 with SIGIO_INC
- remove two lines that set "4" variables to non-"4" variables

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 11, 2022
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Commits on Feb 15, 2022

  1. Add prod_util_ver to orion.ver 

    - only available prod_util on Orion is prod_util/1.2.2
- add prod_util_ver=1.2.2 to orion.ver to override WCOSS2 version

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 15, 2022
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  2. Add prod_util_ver and cmake_ver to hera.ver 

    - add overrides for prod_util and cmake versions to hera.ver
- use available hpc-stack versions to override WCOSS2 defaults

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 15, 2022
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  3. Add cmake_ver to orion.ver 

    - override WCOSS2 default for cmake_ver and use 3.22.1 on Orion

Refs: NOAA-EMC#639
    @KateFriedman-NOAA
    KateFriedman-NOAA committed Feb 15, 2022
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