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Fixed the converters for CTD 2024 data, added hgnc.symbol xrefs, remo…
…ved not so useful synonyms and parent/related/other IDs, etc., added tests. This should generate smaller biopax model.
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# THIS IS an EXCERPT from original CTD_chemicals.csv file for DEV/TESTING PURPOSE! | ||
# The Comparative Toxicogenomics Database (CTD) - http://ctdbase.org/ | ||
# Copyright 2002-2012 MDI Biological Laboratory. All rights reserved. | ||
# Copyright 2012-2024 NC State University. All rights reserved. | ||
# | ||
# | ||
# Use is subject to the terms set forth at http://ctdbase.org/about/legal.jsp | ||
# These terms include: | ||
# | ||
# 1. All forms of publication (e.g., web sites, research papers, databases, | ||
# software applications, etc.) that use or rely on CTD data must cite CTD. | ||
# Citation guidelines: http://ctdbase.org/about/publications/#citing | ||
# | ||
# 2. All electronic or online applications must include hyperlinks from | ||
# contexts that use CTD data to the applicable CTD data pages. | ||
# Linking instructions: http://ctdbase.org/help/linking.jsp | ||
# | ||
# 3. You must notify CTD, and describe your use of our data: | ||
# http://ctdbase.org/help/contact.go | ||
# | ||
# 4. For quality control purposes, you must provide CTD with periodic | ||
# access to your publication of our data. | ||
# | ||
# More information: http://ctdbase.org/downloads/ | ||
# | ||
# Report created: Wed Feb 28 10:59:04 EST 2024 | ||
# | ||
# Fields: | ||
# ChemicalName,ChemicalID,CasRN,Definition,ParentIDs,TreeNumbers,ParentTreeNumbers,Synonyms | ||
# | ||
thiolactic acid,MESH:C023884,79-42-5,,MESH:D013438,D02.886.489/C023884,D02.886.489,"2-mercaptopropanoic acid|2-mercaptopropionic acid|ammonium thiolactate|thiolactic acid, calcium salt (2:1)|thiolactic acid, disilver salt (+1)|thiolactic acid, monoammonium salt|thiolactic acid, monolithium salt|thiolactic acid, (R)-isomer|thiolactic acid, (S)-isomer|thiolactic acid, strontium salt (2:1)" | ||
oxidative potential water,MESH:C106820,,,MESH:D014867,D01.045.250.875/C106820|D01.248.497.158.459.650/C106820|D01.650.550.925/C106820,D01.045.250.875|D01.248.497.158.459.650|D01.650.550.925,dental OPW |
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