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Feature/anndata io #1
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This should open a simple hdf5 dataset (also sent by Stephan) of a mouse brain.
A short (but comprehensive?) summary of everything that can be stored in the .h5ad format can be found at https://anndata.readthedocs.io/en/latest/fileformat-prose.html It seems that only the top-level fields ['X', 'layers', 'obs', 'obsm', 'obsp', 'uns', 'var', 'varm', 'varp'] as well as some sub-fields (like '_index', 'indices', 'indptr', 'data', ...) are prescribed. Other names and structure are chosen by the user.
Current version of N5 cannot handle strings, which might be a dealbreaker for AnnData.
Throw away all other stuff that was just for diagnostics/exploring
The files need to have locations stored under '/obs/locations'
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This is an attempt to include AnnData support:
Major changes in the code:
io
module underwent a major re-design, implementing the features described above.