Add parallel testing support for pass0 and pass1, and other TC fixes (#…

…3195)

* removed -it flag from docker commands, hoping to avoid "the input device is not a TTY" error
* set SmallMoleculesTutorial tests to NoParallelTesting (they use the same ZIP file)
* fixed parallel mode not showing time when finished
* added parallel testing support for pass0 and pass1
* added PassX as the "class" name for TeamCity test grouping (so the same test/language pairs from different passes can be distinguished in TeamCity, although I'm not sure how important that is)
* added teamcitytestsuite parameter to TestRunner to override the automatic one from the test parameter
* added test suite for deployment test (install, test, uninstall, all under one suite)
* fixed some logic with deployment test action
* changed parallel pass # output to match non-parallel output
* changed pass # reported for pass 2 to always start at 2 even if pass0 and/or pass1 are disabled
* fixed prodigious amount of warnings from IsotopePatternRange.ipp