Skip to content
@RCPCM-GCB

RCPCM-GCB

Popular repositories Loading

  1. ENA_tool ENA_tool Public

    Convenient dowloader of raw files for ENA.

    Python 2 1

  2. prepare-KEGG-for-humann2 prepare-KEGG-for-humann2 Public

    Jupyter Notebook 1 1

  3. uc_fmt uc_fmt Public

    Forked from nathanieldchu/uc_fmt

    Code and data to accompany a publication about the dynamics of fecal transplant in ulcerative colitis patients

    Jupyter Notebook

  4. sci2017_analysis sci2017_analysis Public

    Forked from cribioinfo/sci2017_analysis

    Data and analysis scripts for Matson et al. 2017 manuscript

    Jupyter Notebook

  5. ImGQFinder ImGQFinder Public

    Python

  6. chocophlan_tree chocophlan_tree Public

    Scripts to build a tree of genomes from chocophlan database

    Jupyter Notebook

Repositories

Showing 10 of 11 repositories
  • ENA_tool Public

    Convenient dowloader of raw files for ENA.

    RCPCM-GCB/ENA_tool’s past year of commit activity
    Python 2 MIT 1 2 0 Updated Mar 17, 2023
  • COVIDBIOTA_PAPER Public

    code to reproduce analysis from the paper "Microbial communities of the upper respiratory tract in mild and severe COVID-19 patients: a possible link with the disease course]{Microbial communities of the upper respiratory tract in mild and severe COVID-19 patients: a possible link with the disease course""

    RCPCM-GCB/COVIDBIOTA_PAPER’s past year of commit activity
    R 0 0 0 0 Updated Dec 1, 2021
  • batch_effect_correction Public
    RCPCM-GCB/batch_effect_correction’s past year of commit activity
    R 0 0 0 0 Updated Feb 17, 2021
  • CPT2DM_project Public

    The project contains files for Balmasova et al. "The features of gingival sulcus microbiome in patients with chronic periodontitis associated with type 2 diabetes mellitus"

    RCPCM-GCB/CPT2DM_project’s past year of commit activity
    R 0 0 0 0 Updated Jan 22, 2021
  • RECAST_project Public

    The project contains files for Olekhnovich et al, "Separation of donor and recipient microbial diversity allow to determine taxonomic and functional features of microbiota restructuring following fecal transplantation".

    RCPCM-GCB/RECAST_project’s past year of commit activity
    R 0 0 0 0 Updated Jan 15, 2021
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    RCPCM-GCB/bioconda-recipes’s past year of commit activity
    Shell 0 3,330 0 0 Updated Oct 14, 2020
  • ImGQFinder Public
    RCPCM-GCB/ImGQFinder’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 15, 2020
  • chocophlan_tree Public

    Scripts to build a tree of genomes from chocophlan database

    RCPCM-GCB/chocophlan_tree’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 30, 2020
  • sci2017_analysis Public Forked from cribioinfo/sci2017_analysis

    Data and analysis scripts for Matson et al. 2017 manuscript

    RCPCM-GCB/sci2017_analysis’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 9 0 0 Updated Apr 10, 2020
  • prepare-KEGG-for-humann2 Public
    RCPCM-GCB/prepare-KEGG-for-humann2’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Apr 10, 2020
View all repositories

Top languages

Loading…

Most used topics

Loading…