Update Dockerfile

RVanDamme · Nov 5, 2019 · da4809f · da4809f
1 parent fb28301
commit da4809f
Showing 1 changed file with 1 addition and 23 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -7,26 +7,4 @@ RUN conda config --add channels conda-forge && \
     conda config --add channels bioconda && \
     conda config --add channels default
 
-RUN conda install python=3 dammit
-
-RUN mkdir -p /dammit_database && \
-    dammit databases --install --database-dir /dammit_database --busco-group metazoa
-
-
-RUN dammit databases --install --database-dir /dammit_database --busco-group actinobacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group bacillales && \
-    dammit databases --install --database-dir /dammit_database --busco-group bacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group bacteroidetes && \
-    dammit databases --install --database-dir /dammit_database --busco-group betaproteobacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group clostridia && \
-    dammit databases --install --database-dir /dammit_database --busco-group cyanobacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group deltaepsilonsub && \
-    dammit databases --install --database-dir /dammit_database --busco-group enterobacteriales && \
-    dammit databases --install --database-dir /dammit_database --busco-group firmicutes && \
-    dammit databases --install --database-dir /dammit_database --busco-group gammaproteobacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group lactobacillales && \
-    dammit databases --install --database-dir /dammit_database --busco-group metazoa && \
-    dammit databases --install --database-dir /dammit_database --busco-group proteobacteria && \
-    dammit databases --install --database-dir /dammit_database --busco-group rhizobiales && \
-    dammit databases --install --database-dir /dammit_database --busco-group spirochaetes && \
-    dammit databases --install --database-dir /dammit_database --busco-group tenericutes
+RUN conda install python=3 dammit && conda clean -a