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cwlprov_provenance

This repository contains the results of several CWLProv-related experiments and their results.

cachedir_timestamps

If workflow is previously run with --cachedir and later with --provenance, will the timestamps recorded in the RO correspond to the final execution time (when the cached results were used instead of rerunning the steps) or do they (as they should) represent the time of the execution when the results were cached?

Answer: they do incorrectly represent to the final execution time.

cwlviewer_colors

Example workflow to test and enhance the --print-dot function of cwltool such that it distinguishes between components of class Operation (dashed), Workflow (orange) and CommandLineTool (yellow). See PR #...

docker_provenance

To assess whether information about docker containers is included in CWLProv provenance.

modification_date

To assess whether a file specified with a remote location preserves its remote timestamp.

prov_data_annotations

Comparison of CLWProv provenance before and after the propagation of input data annotations.

prov_software_annotations

Design for software metadata in CWLProv provenance.

sl_prov_question

Answer to the question: Are input parameter values included in CWLProv provenance?

software_citation

Are SoftwareRequirement and DockerRequirement included in CWLProv provenance?

sparql_queries

Emulated extended provenance graph (niaa_wf_run/primary.cwlprov.ttl) and associated SPARQL queries (sparql_queries.ipynb) which can extract the newly added information from the RDF graph.

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