Aqua CI

SciML · Dec 28, 2023 · e19951e · e19951e
1 parent aa744e5
commit e19951e
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Showing 5 changed files with 29 additions and 5 deletions.
diff --git a/Project.toml b/Project.toml
@@ -15,18 +15,29 @@ Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
+Aqua = "0.8"
+Cubature = "1"
 Distributions = "0.21, 0.22, 0.23, 0.24, 0.25"
 ExtendableSparse = "1"
 Flux = "0.12, 0.13"
+ForwardDiff = "0.10"
 GLM = "1.3"
 IterativeSolvers = "0.9"
+LinearAlgebra = "1.9"
 PolyChaos = "0.2"
+Pkg = "1"
+QuadGK = "2"
 QuasiMonteCarlo = "0.3"
+SafeTestsets = "0.1"
+SparseArrays = "1.9"
 Statistics = "1"
+Test = "1"
+Tracker = "0.2"
 Zygote = "0.4, 0.5, 0.6"
 julia = "1.9"
 
 [extras]
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
 Cubature = "667455a9-e2ce-5579-9412-b964f529a492"
 Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
 ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
@@ -38,4 +49,4 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
 
 [targets]
-test = ["Cubature", "SafeTestsets", "Flux", "ForwardDiff", "PolyChaos", "QuadGK", "Test", "Tracker", "Pkg"]
+test = ["Aqua", "Cubature", "SafeTestsets", "Flux", "ForwardDiff", "PolyChaos", "QuadGK", "Test", "Tracker", "Pkg"]
diff --git a/src/Optimization.jl b/src/Optimization.jl
@@ -2045,7 +2045,7 @@ function surrogate_optimize(obj, rtea::RTEA, lb, ub, surrRTEAND::AbstractSurroga
     return pareto_set, pareto_front
 end
 
-function surrogate_optimize(obj::Function, ::EI, lb, ub, krig, sample_type::SectionSample;
+function surrogate_optimize(obj::Function, ::EI, lb::AbstractArray, ub::AbstractArray, krig, sample_type::SectionSample;
         maxiters = 100, num_new_samples = 100)
     dtol = 1e-3 * norm(ub - lb)
     eps = 0.01

diff --git a/src/Surrogates.jl b/src/Surrogates.jl
@@ -89,7 +89,7 @@ export LobachevskyStructure,
     SecondOrderPolynomialStructure
 export WendlandStructure
 export AbstractSurrogate, SamplingAlgorithm
-export Kriging, RadialBasis, add_point!, current_estimate, std_error_at_point
+export Kriging, RadialBasis, add_point!, std_error_at_point
 # Parallelization Strategies
 export potential_optimal_points
 export MinimumConstantLiar, MaximumConstantLiar, MeanConstantLiar, KrigingBeliever,
@@ -104,10 +104,9 @@ export sample, GridSample, RandomSample, SobolSample, LatinHypercubeSample,
 export RandomSample, KroneckerSample, GoldenSample, SectionSample
 
 # Optimization algorithms
-export SRBF, LCBS, EI, DYCORS, SOP, EGO, RTEA, SMB, surrogate_optimize
+export SRBF, LCBS, EI, DYCORS, SOP, RTEA, SMB, surrogate_optimize
 export LobachevskySurrogate, lobachevsky_integral, lobachevsky_integrate_dimension
 export LinearSurrogate
-export SVMSurrogate
 export InverseDistanceSurrogate
 export SecondOrderPolynomialSurrogate
 export Wendland

diff --git a/test/qa.jl b/test/qa.jl
@@ -0,0 +1,11 @@
+using Surrogates, Aqua
+@testset "Aqua" begin
+    Aqua.find_persistent_tasks_deps(Surrogates)
+    Aqua.test_ambiguities(Surrogates, recursive = false)
+    Aqua.test_deps_compat(Surrogates)
+    Aqua.test_piracies(Surrogates, broken = true)
+    Aqua.test_project_extras(Surrogates)
+    Aqua.test_stale_deps(Surrogates)
+    Aqua.test_unbound_args(Surrogates)
+    Aqua.test_undefined_exports(Surrogates)
+end
diff --git a/test/runtests.jl b/test/runtests.jl
@@ -10,6 +10,9 @@ function dev_subpkg(subpkg)
 end
 
 @testset "Surrogates" begin
+    @safetestset "Quality Assurance" begin
+        include("qa.jl")
+    end
     @testset "Libs" begin
         @testset "$pkg" for pkg in [
             "SurrogatesAbstractGPs", "SurrogatesFlux",