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Characterize non-chemical treatments #193

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goodb opened this issue Oct 3, 2016 · 1 comment
Open

Characterize non-chemical treatments #193

goodb opened this issue Oct 3, 2016 · 1 comment

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@goodb
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goodb commented Oct 3, 2016

As the 'treatment' annotation is not specific to drugs, it would be interesting to know what other kinds of entities are appearing there. Identify a subset of the treatments with high levels of inter-annotator agreement, manually inspect them to make a statement about what they contain. If there are many, perform an automated analysis using a tool (e.g. Annotator, MetaMap) to map them to high-level semantic groups. This is potentially important particularly because there are not already tools for finding these other kinds of treatments in the literature. It provides a way that the human contributors could generate something unique that machines would miss.

@x0xMaximus
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Potential Discussion Points:

  • Role this has has M2C moves emphasis away form ER
  • New task for subcategorizing Treatment ER annotations
  • Is this an extension of current ER UI / UX through more than 3 annotation types
  • Is this an extension of current ER UI / UX through custom annotation types

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