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A merge between Q55950049 and Q861224 blocks GeneDiseaseBot to update the WD item on DOID:626 #27

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andrawaag opened this issue Feb 5, 2019 · 2 comments
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@andrawaag
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the console output from the GeneDiseaseBot http://jenkins.sulab.org/job/GeneDiseaseBot/332/console indicates an issue with updating Disease Ontology ID 626. It seems that a merge caused this behaviour

Error while writing to Wikidata
{'error': {'code': 'modification-failed', 'info': '[[Q55950049|Q55950049]] not found', 'messages': [{'name': 'wikibase-validator-no-such-entity', 'parameters': ['[[Q55950049|Q55950049]]'], 'html': {'': 'Q55950049 not found'}}], '': 'See https://www.wikidata.org/w/api.php for API usage. Subscribe to the mediawiki-api-announce mailing list at <https://lists.wikimedia.org/mailman/listinfo/mediawiki-api-announce> for notice of API deprecations and breaking changes.'}, 'servedby': 'mw1348'}
Error while writing to Wikidata
{'error': {'code': 'modification-failed', 'info': '[[Q55950049|Q55950049]] not found', 'messages': [{'name': 'wikibase-validator-no-such-entity', 'parameters': ['[[Q55950049|Q55950049]]'], 'html': {'': 'Q55950049 not found'}}], '': 'See https://www.wikidata.org/w/api.php for API usage. Subscribe to the mediawiki-api-announce mailing list at <https://lists.wikimedia.org/mailman/listinfo/mediawiki-api-announce> for notice of API deprecations and breaking changes.'}, 'servedby': 'mw1225'}
Error while writing to Wikidata
{'error': {'code': 'modification-failed', 'info': '[[Q55950049|Q55950049]] not found', 'messages': [{'name': 'wikibase-validator-no-such-entity', 'parameters': ['[[Q55950049|Q55950049]]'], 'html': {'': 'Q55950049 not found'}}], '': 'See https://www.wikidata.org/w/api.php for API usage. Subscribe to the mediawiki-api-announce mailing list at <https://lists.wikimedia.org/mailman/listinfo/mediawiki-api-announce> for notice of API deprecations and breaking changes.'}, 'servedby': 'mw1346'}
Begin creating Wikidata Disease items with new relationships
P2293 not found in fastrun
Error while writing to Wikidata
{'error': {'code': 'modification-failed', 'info': '[[Q55790461|Q55790461]] not found', 'messages': [{'name': 'wikibase-validator-no-such-entity', 'parameters': ['[[Q55790461|Q55790461]]'], 'html': {'': 'Q55790461 not found'}}], '': 'See https://www.wikidata.org/w/api.php for API usage. Subscribe to the mediawiki-api-announce mailing list at <https://lists.wikimedia.org/mailman/listinfo/mediawiki-api-announce> for notice of API deprecations and breaking changes.'}, 'servedby': 'mw1346'}

@andrawaag andrawaag self-assigned this Feb 5, 2019
@andrawaag
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Q55790461 got merged into Q861224. Q55790461 seems to be hardcoded in the bot.

@andrawaag
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Since Jenkins run 337 the issue disappeared. I couldn't find any hardcode mention of Q55790461 in the code. Maybe this was a caching issue.
I am closing this issue for now, but opened #30 to implement error reporting with pointers to responsible code

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