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Merged in NOOS-226-fix-wgs-stats-agg-statement (pull request #33)
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Correct WGS stat agg script
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MikeWLloyd committed Oct 24, 2022
2 parents b25b87e + 9ad2d42 commit 6fc6a1d
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion modules/utility_modules/aggregate_stats_wgs.nf
Original file line number Diff line number Diff line change
Expand Up @@ -18,6 +18,6 @@ process AGGREGATE_STATS {
log.info "----- Generating Summary Stats for: ${sampleID} -----"

"""
python ${projectDir}/bin/wes/aggregate_stats_wes.py ${sampleID}_summary_stats.txt ${filter_stats} ${picard_met} ${algn_met} ${cov_met}
python ${projectDir}/bin/wgs/aggregate_stats_wgs.py ${sampleID}_summary_stats.txt ${filter_stats} ${picard_met} ${algn_met} ${cov_met}
"""
}

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