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Merge pull request #134 from TranslatorSRI/add-releases
This PR adds release information for NameRes December 2023 and October 2023, including changelog and new features.
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# NameRes Releases | ||
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## Translator Releases | ||
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- [October 2023](TranslatorOctober2023.md) | ||
- [December 2023](TranslatorDecember2023.md) |
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# NameRes Translator October 2023 Release | ||
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- Babel: [2023nov5](https://stars.renci.org/var/babel_outputs/2023nov5/) | ||
- NameRes: [v2.3.11](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.11) | ||
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Next release: _None as yet_ | ||
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## New features | ||
* The `/lookup` endpoints now: | ||
* Have an `exclude_prefixes` field that allows prefixes to be excluded (e.g. `UMLS|NCI`). | ||
* Have an `autocomplete` flag. When set to true (the default), NameRes assumes that the search phrase is incomplete | ||
(i.e. a search for `bloo` is expanded to `(bloo) OR (bloo*)` so that we can match `blood`). If set to false, the | ||
search phrase is assumed to be complete (i.e. only `bloo` will be searched for), which should provide better results | ||
when NameRes is used as an named-entity linker by Translator components. | ||
* Report a score for every result. | ||
* Fixed bugs in [GET `/reverse_lookup`](https://name-lookup.test.transltr.io/docs#/lookup/lookup_names_get_reverse_lookup_get) | ||
and [POST `/reverse_lookup`](https://name-lookup.test.transltr.io/docs#/lookup/lookup_names_post_reverse_lookup_post). | ||
Also changes the `/reverse_lookup` return format to include additional information, such as the preferred label and Biolink type. | ||
* Added a [GET `/status`](https://name-lookup.test.transltr.io/docs#/default/status_get_status_get) endpoint to | ||
report on Solr database. | ||
* OTEL/Jaegar telemetry added. | ||
* Minor fixes to Terms of Service and service description. | ||
* Minor fixes to NameRes database builder. | ||
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## Releases since [Translator October 2023 release](TranslatorOctober2023.md) | ||
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* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.7 | ||
* fixes reverse lookup get endpoint. by @YaphetKG in #102 | ||
* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.8 | ||
* Fix Terms of Service and service description by @gaurav in #114 | ||
* Return entire document in reverse lookups by @gaurav in #115 | ||
* Report scores for reverse lookup by @gaurav in #116 | ||
* Add exclude_prefixes parameter to /lookup endpoints by @gaurav in #117 | ||
* Add an autocomplete flag by @gaurav in #118 | ||
* Added a /status endpoint that tells us about this NameRes instance by @gaurav in #119 | ||
* Added instruction to make data/synonyms directory in target data/synonyms/done by @gaurav in #123 | ||
* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.9 | ||
* Otel instrumentation by @YaphetKG in #121 | ||
* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.10 | ||
* Update server.py by @YaphetKG in #130 | ||
* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.11 | ||
* Incremented version that I forgot to do in Name Resolver v1.3.10. |
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# NameRes Translator October 2023 Release | ||
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- Babel: [2023aug](https://stars.renci.org/var/babel_outputs/2023aug3-with-drugs/) (roughly Babel [v1.1.0](https://github.com/TranslatorSRI/Babel/releases/tag/v1.1.0)) | ||
- NameRes: [v1.3.6](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.6) | ||
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Next release: [December 2023](TranslatorDecember2023.md) |