Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Validation based on point mutations #40

Open
alexandrebouchard opened this issue Aug 29, 2018 · 0 comments
Open

Validation based on point mutations #40

alexandrebouchard opened this issue Aug 29, 2018 · 0 comments

Comments

@alexandrebouchard
Copy link
Contributor

Proposed by @kieranrcampbell

  • run pseudo-bulk model on each clade
  • compare with a null model being a random set of cells of same size

Alternatively, run separate tree inference based on point mutations only and do some tree comparisons. Also possible to do joint easily.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant