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A tool for the automation of molecular simulations using multiple engines, focusing on binding affinity calculations

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BAC2

Binding Affinity Calculator 2, a ground up rewrite of the BAC tool intended to unify and simplify the maintenance and use of the tool, and provide a platform on which new functionality can be built.

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes.

Prerequisites

You will need Python 3.6 or higher. Using a conda environment is the easiest way to go.

Installing

You need to clone this repository and run

pip install BAC2/

Authors

  • Kristof Farkas-Pall
  • Dave W. Wright
  • Stefan Zasada
  • Fouad Husseini

See also the list of contributors who participated in this project.

License

This project is licensed under the Apache License - see the LICENSE.md file for details

Structure of this project

  • bac - code
    • build - build layer API top level directory
    • present - present layer API top level directory
    • simulate - simulate layer API top level directory
    • remote - execution of simulation on remote servers
  • client - client code
  • docs - documentation

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A tool for the automation of molecular simulations using multiple engines, focusing on binding affinity calculations

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