Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Adding check on epiworldR #33

Merged
merged 9 commits into from
Nov 19, 2024
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
46 changes: 45 additions & 1 deletion .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,10 @@

name: Tests

on: [push, pull_request]
on:
push:
branches: [ master ]
pull_request:

jobs:
test-macos:
Expand Down Expand Up @@ -52,3 +55,44 @@ jobs:
cd tests
make main.o
./main.o

test-epiworld-r:
runs-on: ubuntu-latest
container: rocker/r2u:latest

steps:
- uses: actions/checkout@v4

- uses: actions/checkout@v4
with:
repository: UofUEpiBio/epiworldR
path: ./r-pkg

- name: Getting epiworldR
run: |
install2.r knitr rmarkdown tinytest netplot igraph data.table
apt-get update && apt-get install -y --no-install-recommends pandoc
cp -r include/epiworld/ r-pkg/inst/include/epiworld/
R CMD build r-pkg
R CMD check --no-manual epiworldR_*.tar.gz

test-epiworld-r-valgrind:
runs-on: ubuntu-latest
container: rocker/r2u:latest

steps:
- uses: actions/checkout@v4

- uses: actions/checkout@v4
with:
repository: UofUEpiBio/epiworldR
path: ./r-pkg

- name: Getting epiworldR
run: |
install2.r knitr rmarkdown tinytest netplot igraph data.table
apt-get update && apt-get install -y --no-install-recommends \
pandoc valgrind
cp -r include/epiworld/ r-pkg/inst/include/epiworld/
R CMD build r-pkg
R CMD check --no-manual --use-valgrind epiworldR_*.tar.gz
Loading