Merge branch 'main' into 40-queuing_off-should-give-warning-if-the-mo…

…del-doesnt-have-a-queue
UofUEpiBio · Dec 10, 2024 · 52ff96f · 52ff96f
2 parents fa6c212 + 70f48d5
commit 52ff96f
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Showing 6 changed files with 8 additions and 5 deletions.
diff --git a/R/plot_epi.R b/R/plot_epi.R
@@ -38,6 +38,9 @@ plot_epi.epiworld_model <- function(
     counts_scale,
     ...
     ) {
+  # Check if model has been run
+  if (length(get_hist_total(x)$counts) <= 0)
+    stop("The model must be run before it can be plotted.")
 
   plot_epi(
     x = get_hist_total(x),

diff --git a/inst/tinytest/test-seir.R b/inst/tinytest/test-seir.R
@@ -26,7 +26,7 @@ expect_silent(agents_smallworld(
 expect_silent(verbose_off(seir_0))
 expect_silent(queuing_off(seir_0))
 expect_silent(initial_states(seir_0, c(.3, .5)))
-expect_warning(expect_error(plot(seir_0))) # Plot fails before model is run
+expect_error(plot(seir_0), "model must be run before it can be plotted")
 expect_silent(run(seir_0, ndays = 100, seed = 1231))
 expect_silent(plot(seir_0)) # Plot succeeds after model is run
 

diff --git a/inst/tinytest/test-sir.R b/inst/tinytest/test-sir.R
@@ -40,7 +40,7 @@ expect_silent(agents_smallworld(
 
 # Check model run with queuing -------------------------------------------------
 expect_silent(verbose_off(sir_0))
-expect_warning(expect_error(plot(sir_0))) # Plot fails before model is run
+expect_error(plot(sir_0), "model must be run before it can be plotted")
 expect_silent(run(sir_0, ndays = 50, seed = 1912))
 expect_silent(plot(sir_0)) # Plot succeeds after model is run
 

diff --git a/inst/tinytest/test-sirconn.R b/inst/tinytest/test-sirconn.R
@@ -41,7 +41,7 @@ expect_length(class(sirconn_0), 2)
 # Check model run with queuing -------------------------------------------------
 expect_silent(verbose_off(sirconn_0))
 expect_warning(queuing_on(sirconn_0), "SIR Connected models do not have queue.")
-expect_warning(expect_error(plot(sirconn_0))) # Plot fails before model is run
+expect_error(plot(sirconn_0), "model must be run before it can be plotted")
 expect_silent(run(sirconn_0, ndays = 100, seed = 131))
 expect_silent(plot(sirconn_0)) # Plot succeeds after model is run
 

diff --git a/inst/tinytest/test-sird.R b/inst/tinytest/test-sird.R
@@ -24,7 +24,7 @@ expect_silent(agents_smallworld(
 # Check model run --------------------------------------------------------------
 expect_silent(verbose_off(sird_0))
 expect_silent(initial_states(sird_0, c(.05, .05)))
-expect_warning(expect_error(plot(sird_0))) # Plot fails before model is run
+expect_error(plot(sird_0), "model must be run before it can be plotted")
 expect_silent(run(sird_0, ndays = 100, seed = 1231))
 expect_silent(plot(sird_0)) # Plot succeeds after model is run
 

diff --git a/inst/tinytest/test-sis.R b/inst/tinytest/test-sis.R
@@ -22,7 +22,7 @@ expect_silent(agents_smallworld(
 
 # Check model run --------------------------------------------------------------
 expect_silent(verbose_off(sis_0))
-expect_warning(expect_error(plot(sis_0))) # Plot fails before model is run
+expect_error(plot(sis_0), "model must be run before it can be plotted")
 expect_silent(run_multiple(
   sis_0,
   ndays=100,