epiworld.hpp replaced by full library (cc @derekmeyer37)

UofUEpiBio · Sep 6, 2023 · 65510f4 · 65510f4
1 parent 517a547
commit 65510f4
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Showing 63 changed files with 17,848 additions and 18,526 deletions.
diff --git a/Makefile b/Makefile
@@ -11,11 +11,11 @@ install: build
 README.md: README.Rmd
 	Rscript --vanilla -e 'rmarkdown::render("README.Rmd")'
 
-update:
-	wget https://raw.githubusercontent.com/UofUEpiBio/epiworld/master/epiworld.hpp && \
-		mv epiworld.hpp inst/include/epiworld.hpp 
+# update:
+# 	wget https://raw.githubusercontent.com/UofUEpiBio/epiworld/master/epiworld.hpp && \
+# 		mv epiworld.hpp inst/include/epiworld.hpp 
 local-update:
-	rsync -avz ../epiworld/epiworld.hpp inst/include/epiworld.hpp
+	rsync -avz ../epiworld/include/epiworld inst/include/.
 
 check: build
 	R CMD check epiworldR_*.tar.gz

diff --git a/README.md b/README.md
@@ -125,8 +125,8 @@ summary(sir)
 #> Number of entities  : 0
 #> Days (duration)     : 50 (of 50)
 #> Number of viruses   : 1
-#> Last run elapsed t  : 193.00ms
-#> Last run speed      : 25.77 million agents x day / second
+#> Last run elapsed t  : 190.00ms
+#> Last run speed      : 26.22 million agents x day / second
 #> Rewiring            : off
 #> 
 #> Global actions: