Moving things out autoconf

Makefile

@@ -12,13 +12,14 @@ docker-debug:
 		--no-docs --build .
 
 install-dev: clean
+	sed -i -E 's/^useDynLib\([a-zA-Z]+/useDynLib(epiworldRdev/g' NAMESPACE
 	sed -i -E 's/^Package:.+/Package: epiworldRdev/g' DESCRIPTION 
+	sed -i -E 's/^\\(name|alias|title)\{[a-zA-Z]+/\\\1{epiworldRdev/g' man/epiworldR-package.Rd
 	sed -i -E 's/^library\([a-zA-Z]+\)/library(epiworldRdev)/g' README.*
 	EPI_DEV=yes R CMD INSTALL .
+	$(MAKE) clean
 
 install: clean
-	sed -i -E 's/^Package:.+/Package: epiworldR/g' DESCRIPTION 
-	sed -i -E 's/^library\([a-zA-Z]+\)/library(epiworldR)/g' README.*
 	R CMD INSTALL .
 
 
@@ -36,6 +37,12 @@ check: build
 
 clean: 
 	Rscript --vanilla -e 'devtools::clean_dll()'
+	sed -i -E 's/^useDynLib\([a-zA-Z]+/useDynLib(epiworldR/g' NAMESPACE
+	sed -i -E 's/^Package:.+/Package: epiworldR/g' DESCRIPTION 
+	sed -i -E 's/^\\(name|alias|title)\{[a-zA-Z]+/\\\1{epiworldR/g' man/epiworldR-package.Rd
+	sed -i -E 's/^\\(name|alias|title)\{[a-zA-Z]+/\\\1{epiworldR/g' R/epiworldR-package.Rd
+
+	sed -i -E 's/^library\([a-zA-Z]+\)/library(epiworldR)/g' README.*
 
 docs:
 	Rscript --vanilla -e 'devtools::document()'

configure

@@ -3385,11 +3385,6 @@ ac_config_files="$ac_config_files src/Makevars R/epiworldR-package.R"
 # Use sed to replace the line useDynLib\([a-zA-Z]+ in the NAMESPACE
 # file with useDynLib(${epiworldname}
 
-
-
-
-
-
 cat >confcache <<\_ACEOF
 # This file is a shell script that caches the results of configure
 # tests run on this system so they can be shared between configure
@@ -4515,12 +4510,6 @@ ac_clean_files=$ac_clean_files_save
 test $ac_write_fail = 0 ||
   as_fn_error $? "write failure creating $CONFIG_STATUS" "$LINENO" 5
 
-sed -i -E 's/^useDynLib\([a-zA-Z]+/useDynLib('"${epiworldname}"'/g' NAMESPACE
-
-sed -i -E 's/^Package:.+/Package: '"${epiworldname}"'/g' DESCRIPTION
-
-sed -i -E 's/^\\(name|alias|title)\{[a-zA-Z]+/\\\1{'"${epiworldname}"'/g' man/epiworldR-package.Rd
-
 
 # configure is writing to config.log, and then calls config.status.
 # config.status does its own redirection, appending to config.log.

configure.ac

@@ -183,16 +183,5 @@ AC_CONFIG_FILES([src/Makevars R/epiworldR-package.R])
 
 # Use sed to replace the line useDynLib\([a-zA-Z]+ in the NAMESPACE
 # file with useDynLib(${epiworldname}
-AC_CONFIG_COMMANDS_POST(
-    [sed -i -E 's/^useDynLib\([[a-zA-Z]]+/useDynLib('"${epiworldname}"'/g' NAMESPACE]
-    )
-
-AC_CONFIG_COMMANDS_POST(
-    [sed -i -E 's/^Package:.+/Package: '"${epiworldname}"'/g' DESCRIPTION]
-    )
-
-AC_CONFIG_COMMANDS_POST(
-    [sed -i -E 's/^\\(name|alias|title)\{[[a-zA-Z]]+/\\\1{'"${epiworldname}"'/g' man/epiworldR-package.Rd]
-    )
 
 AC_OUTPUT