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Add alternatives to Comet #36

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vedran-kasalica opened this issue Jan 29, 2024 · 2 comments
Open
2 of 4 tasks

Add alternatives to Comet #36

vedran-kasalica opened this issue Jan 29, 2024 · 2 comments

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@vedran-kasalica
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vedran-kasalica commented Jan 29, 2024 •
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Alternatives to Comet:

MSFragger, Sage, Andromeda, Tide, MyriMatch, OMSSA, X!Tandem, MS Amanda, MS-GF+, ...

To implement:

  • MS Amanda - should be straightforward docker and bio.tools should be updated to match Comet - documentation here
  • MSFragger
  • Tide - requires to be added to bio.tools
  • Sage - requires a post-processing step, so can be implemented at a later stage
@vedran-kasalica vedran-kasalica converted this from a draft issue Jan 29, 2024
@vedran-kasalica vedran-kasalica changed the title Alternatives to Comet Add alternatives to Comet Jan 29, 2024
@magnuspalmblad
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https://ms.imp.ac.at/?goto=msamanda

@magnuspalmblad
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https://crux.ms/commands/tide-search.html

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