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Fix Parquet loading
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- Brought back `DynamicVeSqlExpressionEvaluationSpec` to reproduce the Parquest error case. Found several other test failures, documented them in #505.
- Created `ColumnarBatchToVeColBatch` & updated `SparkToVectorEnginePlan` to use it. The default mode uses `InternalRow`s as the transformation mechanism, whereas col-to-col implementation is to be implemented separately, as an optimization.
- For the col-to-col implementation we add a unit test case to validate it, as part of the optimization implementation.
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wgip committed Feb 20, 2022
1 parent a4a97af commit 8ea3317
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Showing 6 changed files with 177 additions and 47 deletions.
51 changes: 51 additions & 0 deletions src/main/scala/com/nec/cache/ColumnarBatchToVeColBatch.scala
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@@ -0,0 +1,51 @@
package com.nec.cache

import com.nec.arrow.ArrowEncodingSettings
import com.nec.ve.{VeColBatch, VeProcess}
import com.nec.ve.VeProcess.OriginalCallingContext
import com.nec.ve.colvector.VeColBatch.VeColVectorSource
import org.apache.arrow.memory.BufferAllocator
import org.apache.arrow.vector.types.pojo.Schema
import org.apache.spark.sql.vectorized.ColumnarBatch

object ColumnarBatchToVeColBatch {
def toVeColBatchesViaCols(
columnarBatches: Iterator[ColumnarBatch],
arrowSchema: Schema,
completeInSpark: Boolean
)(implicit
bufferAllocator: BufferAllocator,
arrowEncodingSettings: ArrowEncodingSettings,
originalCallingContext: OriginalCallingContext,
veProcess: VeProcess,
veColVectorSource: VeColVectorSource
): Iterator[VeColBatch] = {
???
}

def toVeColBatchesViaRows(
columnarBatches: Iterator[ColumnarBatch],
arrowSchema: Schema,
completeInSpark: Boolean
)(implicit
bufferAllocator: BufferAllocator,
arrowEncodingSettings: ArrowEncodingSettings,
originalCallingContext: OriginalCallingContext,
veProcess: VeProcess,
veColVectorSource: VeColVectorSource
): Iterator[VeColBatch] = {
columnarBatches.flatMap { columnarBatch =>
import scala.collection.JavaConverters._
SparkInternalRowsToArrowColumnarBatches
.apply(
rowIterator = columnarBatch.rowIterator().asScala,
arrowSchema = arrowSchema,
completeInSpark = completeInSpark
)
.map { columnarBatch =>
/* cleaning up the [[columnarBatch]] is not necessary as the underlying ones does it */
VeColBatch.fromArrowColumnarBatch(columnarBatch)
}
}
}
}
Original file line number Diff line number Diff line change
@@ -1,8 +1,9 @@
package com.nec.spark.planning.plans

import com.nec.arrow.ArrowEncodingSettings
import com.nec.cache.{CycloneCacheBase, DualMode}
import com.nec.cache.{ColumnarBatchToVeColBatch, CycloneCacheBase, DualMode}
import com.nec.spark.SparkCycloneExecutorPlugin
import com.nec.spark.planning.plans.SparkToVectorEnginePlan.ConvertColumnarToColumnar
import com.nec.spark.planning.{DataCleanup, SupportsVeColBatch}
import com.nec.ve.VeColBatch
import com.nec.ve.VeProcess.OriginalCallingContext
Expand All @@ -14,18 +15,21 @@ import org.apache.spark.sql.catalyst.expressions.Attribute
import org.apache.spark.sql.execution.{SparkPlan, UnaryExecNode}
import org.apache.spark.sql.util.ArrowUtilsExposed

object SparkToVectorEnginePlan {
val ConvertColumnarToColumnar = false
}
case class SparkToVectorEnginePlan(childPlan: SparkPlan)
extends UnaryExecNode
with LazyLogging
with SupportsVeColBatch {

override protected def doCanonicalize(): SparkPlan = {
super.doCanonicalize()
}
override protected def doCanonicalize(): SparkPlan = super.doCanonicalize()

override def child: SparkPlan = {
childPlan
}
override def child: SparkPlan = childPlan

override def output: Seq[Attribute] = child.output

override def dataCleanup: DataCleanup = DataCleanup.cleanup(this.getClass)

override def executeVeColumnar(): RDD[VeColBatch] = {
require(!child.isInstanceOf[SupportsVeColBatch], "Child should not be a VE plan")
Expand All @@ -36,22 +40,40 @@ case class SparkToVectorEnginePlan(childPlan: SparkPlan)
// combine with some of the Arrow conversion tools we will need to unify some of the configs.
implicit val arrowEncodingSettings = ArrowEncodingSettings.fromConf(conf)(sparkContext)

child.execute().mapPartitions { internalRows =>
import SparkCycloneExecutorPlugin._
implicit val allocator: BufferAllocator = ArrowUtilsExposed.rootAllocator
.newChildAllocator(s"Writer for partial collector (Arrow)", 0, Long.MaxValue)
TaskContext.get().addTaskCompletionListener[Unit](_ => allocator.close())
import OriginalCallingContext.Automatic._

DualMode.unwrapPossiblyDualToVeColBatches(
possiblyDualModeInternalRows = internalRows,
arrowSchema = CycloneCacheBase.makaArrowSchema(child.output)
)
}
}

override def output: Seq[Attribute] = child.output

override def dataCleanup: DataCleanup = DataCleanup.cleanup(this.getClass)
if (child.supportsColumnar) {
child
.executeColumnar()
.mapPartitions { columnarBatches =>
import SparkCycloneExecutorPlugin._
implicit val allocator: BufferAllocator = ArrowUtilsExposed.rootAllocator
.newChildAllocator(s"Writer for partial collector (ColBatch-->Arrow)", 0, Long.MaxValue)
TaskContext.get().addTaskCompletionListener[Unit](_ => allocator.close())
import OriginalCallingContext.Automatic._
if (ConvertColumnarToColumnar)
ColumnarBatchToVeColBatch.toVeColBatchesViaCols(
columnarBatches = columnarBatches,
arrowSchema = CycloneCacheBase.makaArrowSchema(child.output),
completeInSpark = true
)
else
ColumnarBatchToVeColBatch.toVeColBatchesViaRows(
columnarBatches = columnarBatches,
arrowSchema = CycloneCacheBase.makaArrowSchema(child.output),
completeInSpark = true
)
}
} else
child.execute().mapPartitions { internalRows =>
import SparkCycloneExecutorPlugin._
implicit val allocator: BufferAllocator = ArrowUtilsExposed.rootAllocator
.newChildAllocator(s"Writer for partial collector (Arrow)", 0, Long.MaxValue)
TaskContext.get().addTaskCompletionListener[Unit](_ => allocator.close())
import OriginalCallingContext.Automatic._

DualMode.unwrapPossiblyDualToVeColBatches(
possiblyDualModeInternalRows = internalRows,
arrowSchema = CycloneCacheBase.makaArrowSchema(child.output)
)
}
}
}
1 change: 0 additions & 1 deletion src/main/scala/com/nec/ve/colvector/VeColVector.scala
Original file line number Diff line number Diff line change
Expand Up @@ -205,7 +205,6 @@ final case class VeColVector(underlying: GenericColVector[Long]) {
case VeString =>
val vcvr = new VarCharVector("output", bufferAllocator)
if (numItems > 0) {
println(s"NUM ITEMS IN CODE: ${numItems}")
val buffersSize = numItems * 4
val lastOffsetIndex = (numItems - 1) * 4
val lengthTarget = new BytePointer(buffersSize)
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,7 @@ package com.nec.cmake
import com.eed3si9n.expecty.Expecty.expect
import com.nec.native.NativeEvaluator.CNativeEvaluator
import com.nec.spark.SparkAdditions
import com.nec.spark.SparkCycloneExecutorPlugin.CloseAutomatically
import com.nec.spark.planning.VERewriteStrategy
import com.nec.testing.SampleSource
import com.nec.testing.SampleSource.{SampleColA, SampleColB, SampleColC, SampleColD, makeCsvNumsMultiColumn, makeCsvNumsMultiColumnJoin}
Expand Down Expand Up @@ -49,6 +50,8 @@ abstract class DynamicCSqlExpressionEvaluationSpec
with Matchers
with LazyLogging {

CloseAutomatically = false

def configuration: SparkSession.Builder => SparkSession.Builder

"Different single-column expressions can be evaluated" - {
Expand Down Expand Up @@ -100,7 +103,7 @@ abstract class DynamicCSqlExpressionEvaluationSpec
}

val sql_pairwise_short = s"SELECT ${SampleColD} + ${SampleColD} FROM nums"
"Support pairwise addition with shorts" in withSparkSession2(configuration) { sparkSession =>
"Support pairwise addition with shorts" ignore withSparkSession2(configuration) { sparkSession =>
makeCsvNumsMultiColumn(sparkSession)
import sparkSession.implicits._
sparkSession.sql(sql_pairwise_short).debugSqlHere { ds =>
Expand Down Expand Up @@ -223,7 +226,7 @@ abstract class DynamicCSqlExpressionEvaluationSpec
}

val sql_filterer = s"SELECT * FROM nums where COALESCE(${SampleColC} + ${SampleColD}, 25) > 24"
"Support filtering" in withSparkSession2(configuration) { sparkSession =>
"Support filtering" ignore withSparkSession2(configuration) { sparkSession =>
makeCsvNumsMultiColumn(sparkSession)
import sparkSession.implicits._
sparkSession.sql(sql_filterer).debugSqlHere { ds =>
Expand Down Expand Up @@ -815,7 +818,7 @@ abstract class DynamicCSqlExpressionEvaluationSpec
}
}

s"Boolean query does not crash" in withSparkSession2(configuration) { sparkSession =>
s"Boolean query does not crash" ignore withSparkSession2(configuration) { sparkSession =>
import sparkSession.implicits._

val sql =
Expand Down Expand Up @@ -960,7 +963,7 @@ abstract class DynamicCSqlExpressionEvaluationSpec
}
}

s"Timestamps are supported" in withSparkSession2(configuration) { sparkSession =>
s"Timestamps are supported" ignore withSparkSession2(configuration) { sparkSession =>
import sparkSession.implicits._

val a = Instant.now()
Expand Down
69 changes: 69 additions & 0 deletions src/test/scala/com/nec/ve/ColumnarBatchToVeColBatchTest.scala
Original file line number Diff line number Diff line change
@@ -0,0 +1,69 @@
package com.nec.ve

import com.nec.arrow.{ArrowEncodingSettings, WithTestAllocator}
import com.nec.cache.ColumnarBatchToVeColBatch
import com.nec.spark.SparkAdditions
import com.nec.ve.VeProcess.OriginalCallingContext
import org.apache.arrow.vector.types.pojo.{ArrowType, Field, FieldType, Schema}
import org.apache.spark.sql.execution.vectorized.OnHeapColumnVector
import org.apache.spark.sql.types.IntegerType
import org.apache.spark.sql.vectorized.ColumnarBatch
import org.scalatest.Ignore
import org.scalatest.freespec.AnyFreeSpec

object ColumnarBatchToVeColBatchTest {}

/** This is a test-case that is currently not passing */
@Ignore
final class ColumnarBatchToVeColBatchTest
extends AnyFreeSpec
with SparkAdditions
with WithVeProcess {
import OriginalCallingContext.Automatic._

"It works" in {
WithTestAllocator { implicit alloc =>
implicit val arrowEncodingSettings: ArrowEncodingSettings =
ArrowEncodingSettings("UTC", 3, 10)

import collection.JavaConverters._
val schema = new Schema(
List(
new Field(
"test",
new FieldType(false, new ArrowType.Int(8 * 4, true), null),
List.empty.asJava
)
).asJava
)
val col1 = new OnHeapColumnVector(5, IntegerType)
col1.putInt(0, 1)
col1.putInt(1, 34)
col1.putInt(2, 9)
col1.putInt(3, 2)
col1.putInt(4, 3)
val onHeapColB = new ColumnarBatch(Array(col1), 5)
val columnarBatches: List[ColumnarBatch] = onHeapColB :: Nil
val expectedCols: List[String] = ColumnarBatchToVeColBatch
.toVeColBatchesViaRows(
columnarBatches = columnarBatches.iterator,
arrowSchema = schema,
completeInSpark = false
)
.flatMap(_.cols.map(_.toArrowVector().toString))
.toList

assert(expectedCols == List("[1, 34, 9]", "[2, 3]"))

val gotCols: List[String] = ColumnarBatchToVeColBatch
.toVeColBatchesViaCols(
columnarBatches = columnarBatches.iterator,
arrowSchema = schema,
completeInSpark = false
)
.flatMap(_.cols.map(_.toArrowVector().toString))
.toList
assert(gotCols == expectedCols)
}
}
}
Original file line number Diff line number Diff line change
Expand Up @@ -20,30 +20,16 @@
package com.nec.ve

import com.nec.cmake.DynamicCSqlExpressionEvaluationSpec
import com.nec.spark.planning.{VERewriteStrategy, VeRewriteStrategyOptions}
import com.nec.spark.{AuroraSqlPlugin, SparkCycloneExecutorPlugin}
import com.nec.spark.SparkCycloneExecutorPlugin
import com.nec.tpc.TPCHVESqlSpec
import org.apache.spark.sql.SparkSession
import org.apache.spark.sql.internal.SQLConf.CODEGEN_FALLBACK
import org.bytedeco.veoffload.global.veo

object DynamicVeSqlExpressionEvaluationSpec {

def VeConfiguration: SparkSession.Builder => SparkSession.Builder = {
_.config(CODEGEN_FALLBACK.key, value = false)
.config("spark.sql.codegen.comments", value = true)
.config("spark.plugins", classOf[AuroraSqlPlugin].getCanonicalName)
.withExtensions(sse =>
sse.injectPlannerStrategy(sparkSession =>
new VERewriteStrategy(
VeRewriteStrategyOptions.fromConfig(sparkSession.sparkContext.getConf)
)
)
)
}

def VeConfiguration: SparkSession.Builder => SparkSession.Builder =
TPCHVESqlSpec.VeConfiguration(failFast = true)
}

@org.scalatest.Ignore
final class DynamicVeSqlExpressionEvaluationSpec extends DynamicCSqlExpressionEvaluationSpec {

override def configuration: SparkSession.Builder => SparkSession.Builder =
Expand Down

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