Skip to content
@Zhong-Lab-UCSD

Zhong Lab @ UCSD

Participating genomics research

Popular repositories Loading

  1. Genomic-Interactive-Visualization-Engine Genomic-Interactive-Visualization-Engine Public

    Genomic Interactive Visualization Engine

    JavaScript 145 31

  2. HiCtool HiCtool Public

    Python library for processing and visualizing Hi-C data

    Python 20 7

  3. RNA3Dgenome-code-repository RNA3Dgenome-code-repository Public

    Collection of all the codes used for the paper "Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells"

    R 7

  4. MUSIC-tools MUSIC-tools Public

    R 4

  5. BENG183 BENG183 Public

    Lecture materials

    3 83

  6. iMARGI-Docker iMARGI-Docker Public

    iMARGI-Docker distributes the iMARGI sequencing data processing pipeline

    Shell 3 5

Repositories

Showing 10 of 39 repositories
  • 4DN-Web-Portal Public

    Web Portal for 4DN

    Zhong-Lab-UCSD/4DN-Web-Portal’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 20, 2024
  • BENG183_2024Fall_Applied-Genomic-Technologies Public

    Repo for BENG 183 Applied Genomic Technologies 2024 Fall

    Zhong-Lab-UCSD/BENG183_2024Fall_Applied-Genomic-Technologies’s past year of commit activity
    Jupyter Notebook 3 52 0 0 Updated Dec 15, 2024
  • MUSIC-tools Public
    Zhong-Lab-UCSD/MUSIC-tools’s past year of commit activity
    R 4 0 0 0 Updated Oct 20, 2024
  • PRIMseqTools Public
    Zhong-Lab-UCSD/PRIMseqTools’s past year of commit activity
    Python 0 0 0 0 Updated Jul 6, 2024
  • Zhong-Lab-UCSD/breast_cancer_recurrence_classifier’s past year of commit activity
    0 2 0 0 Updated May 26, 2024
  • project_sample_code Public

    Course project: Breast cancer classifier based on silver-seq data

    Zhong-Lab-UCSD/project_sample_code’s past year of commit activity
    R 0 0 0 0 Updated May 6, 2024
  • Zhong-Lab-UCSD/AD_prediction_blood’s past year of commit activity
    0 1 0 0 Updated May 1, 2024
  • Zhong-Lab-UCSD/MUSIC-docker’s past year of commit activity
    Python 2 1 0 0 Updated Mar 15, 2024
  • Zhong-Lab-UCSD/MUSIC-Snakemake’s past year of commit activity
    Python 1 0 0 0 Updated Mar 3, 2024
  • HiFislides Public

    Processing pipeline for the HiFi-Slides technology developed in the Sheng Zhong Lab.

    Zhong-Lab-UCSD/HiFislides’s past year of commit activity
    R 0 0 0 0 Updated Feb 6, 2024