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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,108 @@ | ||
| name: parafold | ||
| channels: | ||
| - bioconda | ||
| - conda-forge | ||
| - nvidia/label/cuda-11.3.1 | ||
| - defaults | ||
| dependencies: | ||
| - _libgcc_mutex=0.1=main | ||
| - _openmp_mutex=5.1=1_gnu | ||
| - blas=1.0=openblas | ||
| - ca-certificates=2023.01.10=h06a4308_0 | ||
| - certifi=2023.5.7=py38h06a4308_0 | ||
| - cuda-nvcc=11.3.122=h4814707_0 | ||
| - cudatoolkit=11.3.1=h2bc3f7f_2 | ||
| - cudnn=8.2.1=cuda11.3_0 | ||
| - fftw=3.3.10=nompi_h77c792f_102 | ||
| - hhsuite=3.3.0=py38pl5321h8ded8fe_5 | ||
| - hmmer=3.3.2=h87f3376_2 | ||
| - kalign2=2.04=hec16e2b_3 | ||
| - ld_impl_linux-64=2.38=h1181459_1 | ||
| - libblas=3.9.0=15_linux64_openblas | ||
| - libcblas=3.9.0=15_linux64_openblas | ||
| - libffi=3.4.2=h6a678d5_6 | ||
| - libgcc-ng=11.2.0=h1234567_1 | ||
| - libgfortran-ng=12.2.0=h69a702a_19 | ||
| - libgfortran5=12.2.0=h337968e_19 | ||
| - libgomp=11.2.0=h1234567_1 | ||
| - liblapack=3.9.0=15_linux64_openblas | ||
| - libnsl=2.0.0=h5eee18b_0 | ||
| - libopenblas=0.3.20=pthreads_h78a6416_0 | ||
| - libstdcxx-ng=11.2.0=h1234567_1 | ||
| - ncurses=6.4=h6a678d5_0 | ||
| - numpy-base=1.24.3=py38h1e6e340_0 | ||
| - ocl-icd=2.3.1=h7f98852_0 | ||
| - ocl-icd-system=1.0.0=1 | ||
| - openmm=7.7.0=py38h4b4c9af_1 | ||
| - openssl=1.1.1t=h7f8727e_0 | ||
| - pdbfixer=1.8.1=pyh6c4a22f_0 | ||
| - perl=5.32.1=0_h5eee18b_perl5 | ||
| - pip=22.3.1=py38h06a4308_0 | ||
| - python=3.8.16=h7a1cb2a_2 | ||
| - python_abi=3.8=2_cp38 | ||
| - readline=8.2=h5eee18b_0 | ||
| - setuptools=65.6.3=py38h06a4308_0 | ||
| - sqlite=3.40.1=h5082296_0 | ||
| - tk=8.6.12=h1ccaba5_0 | ||
| - wheel=0.37.1=pyhd3eb1b0_0 | ||
| - xz=5.2.10=h5eee18b_1 | ||
| - zlib=1.2.13=h5eee18b_0 | ||
| - pip: | ||
| - absl-py==1.0.0 | ||
| - astunparse==1.6.3 | ||
| - biopython==1.79 | ||
| - cachetools==5.3.0 | ||
| - charset-normalizer==3.0.1 | ||
| - chex==0.0.7 | ||
| - contextlib2==21.6.0 | ||
| - dm-haiku==0.0.9 | ||
| - dm-tree==0.1.6 | ||
| - flatbuffers==23.1.21 | ||
| - gast==0.4.0 | ||
| - google-auth==2.16.0 | ||
| - google-auth-oauthlib==0.4.6 | ||
| - google-pasta==0.2.0 | ||
| - grpcio==1.51.1 | ||
| - h5py==3.8.0 | ||
| - idna==3.4 | ||
| - immutabledict==2.0.0 | ||
| - importlib-metadata==6.0.0 | ||
| - jax==0.3.25 | ||
| - jaxlib==0.3.25+cuda11.cudnn82 | ||
| - jmp==0.0.4 | ||
| - keras==2.11.0 | ||
| - libclang==15.0.6.1 | ||
| - markdown==3.4.1 | ||
| - markupsafe==2.1.2 | ||
| - ml-collections==0.1.0 | ||
| - numpy==1.21.6 | ||
| - oauthlib==3.2.2 | ||
| - opt-einsum==3.3.0 | ||
| - packaging==23.0 | ||
| - pandas==1.3.4 | ||
| - protobuf==3.19.6 | ||
| - py3dmol==2.0.1.post1 | ||
| - pyasn1==0.4.8 | ||
| - pyasn1-modules==0.2.8 | ||
| - python-dateutil==2.8.2 | ||
| - pytz==2022.7.1 | ||
| - pyyaml==6.0 | ||
| - requests==2.28.2 | ||
| - requests-oauthlib==1.3.1 | ||
| - rsa==4.9 | ||
| - scipy==1.7.0 | ||
| - six==1.16.0 | ||
| - tabulate==0.9.0 | ||
| - tensorboard==2.11.2 | ||
| - tensorboard-data-server==0.6.1 | ||
| - tensorboard-plugin-wit==1.8.1 | ||
| - tensorflow-cpu==2.11.0 | ||
| - tensorflow-estimator==2.11.0 | ||
| - tensorflow-io-gcs-filesystem==0.30.0 | ||
| - termcolor==2.2.0 | ||
| - toolz==0.12.0 | ||
| - typing-extensions==4.5.0 | ||
| - urllib3==1.26.14 | ||
| - werkzeug==2.2.3 | ||
| - wrapt==1.14.1 | ||
| - zipp==3.13.0 |