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Fix signed / unsigned char weirdness in extension masks <=> nucl mapp… #17

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Fix signed / unsigned char weirdness in extension masks <=> nucl mapp…

Fix signed / unsigned char weirdness in extension masks <=> nucl mapp… #17

Triggered via push April 8, 2024 09:25
@aslasl
pushed d28746b
next
Status Success
Total duration 33m 54s
Artifacts 1

usecases.yml

on: push
🚧 Build SPAdes
4m 38s
🚧 Build SPAdes
Multicell B.cereus TruSeq 100x
4m 25s
Multicell B.cereus TruSeq 100x
Nextera L.monocytogenes
57s
Nextera L.monocytogenes
Contigs E.coli JGI lane 7
3m 48s
Contigs E.coli JGI lane 7
Full run M.ruber JGI lane 9
5m 40s
Full run M.ruber JGI lane 9
IonTorrent E.coli K12
29m 0s
IonTorrent E.coli K12
Mate-pairs B.faecium
2m 9s
Mate-pairs B.faecium
Single-cell P.heparinus JGI lane 7
2m 44s
Single-cell P.heparinus JGI lane 7
plasmidSPAdes C.callunae
7m 18s
plasmidSPAdes C.callunae
Single reads E.coli Deeptrench
1m 37s
Single reads E.coli Deeptrench
PacBio M.ruber
3m 46s
PacBio M.ruber
Saves E.coli 100K
40s
Saves E.coli 100K
Saves E.coli UCSD lane 1
8m 47s
Saves E.coli UCSD lane 1
metaSPAdes JGI 150
15m 24s
metaSPAdes JGI 150
metaviralSPAdes ERR525599
15m 16s
metaviralSPAdes ERR525599
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15 warnings
🚧 Build SPAdes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Mate-pairs B.faecium
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Contigs E.coli JGI lane 7
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Nextera L.monocytogenes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Full run M.ruber JGI lane 9
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single reads E.coli Deeptrench
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Multicell B.cereus TruSeq 100x
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell P.heparinus JGI lane 7
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
plasmidSPAdes C.callunae
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
PacBio M.ruber
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Saves E.coli 100K
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
metaSPAdes JGI 150
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
metaviralSPAdes ERR525599
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Saves E.coli UCSD lane 1
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
IonTorrent E.coli K12
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

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