Utilities for working with RepeatMasker Libraries and Annotations.

extractAncestral.py: Extract specified consensus sequences from .embl format repeatMasker Libraries. makePseudoChroms.py: Assemble fasta sequences into pseudochromosomes, separated by a given spacer sequence. queryRepeatDatabase.pl: Query repeat database to retrieve specified (sets of) repeats. Based on Arian Smit's original utility.