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  1. 2020-ncov 2020-ncov Public

    Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling study. Lancet Infectious Diseases, 2020

    HTML 70 31

  2. scrapR scrapR Public

    Extract raw underlying data from PDF figures

    R 56 7

  3. epiverse-trace/epiparameter epiverse-trace/epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 33 11

  4. 2020-cov-tracing 2020-cov-tracing Public

    Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a ma…

    R 13 14

  5. seroanalytics/serosolver seroanalytics/serosolver Public

    Inference framework for serological data

    R 16 7

  6. rules-of-contagion rules-of-contagion Public

    Code and data to accompany The Rules of Contagion

    R 16 2