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cleanup perl/INSTALL.md
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akotlar committed Sep 18, 2024
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Expand Up @@ -8,12 +8,21 @@ To build a Docker image using the `Dockerfile`, run the following:
cd ../ && docker build -t bystro-annotator -f Dockerfile.perl .
```

## Installing Bystro Annotator Bare Metal / Locally For Development
## Installing Bystro Annotator Bare Metal / Locally

The easiest way to install Bystro directly on your machine is to run:

- Debian/Ubuntu: `../install-apt.sh`
- Centos/Fedora/Amazon Linux: `../install-rpm.sh`

You will be prompted for "sudo" access to install the necessary system level dependencies.

## Manual Install

First you'll need to install some prerequisites:

- Debian/Ubuntu: 'sudo ../install/install-rpm-deps.sh`
- Centos/Fedora/Amazon Linux: 'sudo ../install/install-apt-depts.sh`
- Debian/Ubuntu: 'sudo ../install/install-apt-deps.sh`
- Centos/Fedora/Amazon Linux: 'sudo ../install/install-rmp-deps.sh`
- bgzip: `../install/install-htslib.sh ~/.profile ~/.local`

Bystro also relies on a few `Go` programs, which can be installed with the following:
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