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Removed convert job in build CI
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andreped committed Sep 2, 2024
1 parent 2ec308e commit ff40756
Showing 1 changed file with 1 addition and 39 deletions.
40 changes: 1 addition & 39 deletions .github/workflows/build.yml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ name: Build Package

on:
push:
branches: '*'
branches: ['main']
pull_request:
branches: ['main']
workflow_dispatch:
Expand Down Expand Up @@ -63,41 +63,3 @@ jobs:
- name: Test CLI
run: vsi2tif --help
shell: bash

test-convert:
needs: build
runs-on: macos-latest
steps:
- name: Checkout repo
uses: actions/checkout@v1

- name: Set up Python 3.10
uses: actions/setup-python@v2
with:
python-version: '3.10'

- name: Download artifact
uses: actions/download-artifact@v3
with:
name: "Python wheel"

- name: Install wheel
run: pip install --find-links=. vsi2tif-*
shell: bash

- name: Install vips
run: brew install vips

- name: Download bftools
run: |
wget http://downloads.openmicroscopy.org/latest/bio-formats5.6/artifacts/bftools.zip
unzip bftools.zip
- name: Convert WSI
run: |
wget https://openslide.cs.cmu.edu/download/openslide-testdata/Olympus/OS-2.zip
unzip OS-2.zip
- name: Test conversion
run: vsi2tif -i ./OS-2/ -o ./output/ -b bftools/bfconvert
shell: bash

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