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emitanaka committed Apr 1, 2024
1 parent 0f74fc9 commit 5512ff8
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"0","#| include: false
library(tidyverse)
"
"2","── Attaching core tidyverse packages ────────────────────────────── tidyverse 2.0.0 ──
✔ dplyr  1.1.4 ✔ readr  2.1.4
✔ forcats  1.0.0 ✔ stringr  1.5.1
✔ ggplot2  3.5.0 ✔ tibble  3.2.1
✔ lubridate 1.9.3 ✔ tidyr  1.3.0
✔ purrr  1.0.2 "
"2","── Conflicts ──────────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
ℹ Use the ]8;;http://conflicted.r-lib.org/conflicted package]8;; to force all conflicts to become errors"
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"0","help(mutate_each, package = ""dplyr"") # deprecated
help(sample_frac, package = ""dplyr"")
help(mutate, package = ""dplyr"") # look the .by argument"
"2","/bin/sh: webr-r: command not found
"
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"0","#| include: false
library(tidyverse)
"
"2","── Attaching core tidyverse packages ─────────────────────── tidyverse 2.0.0 ──
✔ dplyr  1.1.4 ✔ readr  2.1.5
✔ forcats  1.0.0 ✔ stringr  1.5.1
✔ ggplot2  3.5.0 ✔ tibble  3.2.1
✔ lubridate 1.9.3 ✔ tidyr  1.3.1
✔ purrr  1.0.2 "
"2","── Conflicts ───────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks dm::filter(), stats::filter()
✖ dplyr::lag() masks stats::lag()
ℹ Use the ]8;;http://conflicted.r-lib.org/conflicted package]8;; to force all conflicts to become errors"
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"0","dm(plots, species, surveys) |>
dm_draw()
"
"2","Registered S3 method overwritten by 'htmlwidgets':
method from
print.htmlwidget tools:rstudio
"
2 changes: 1 addition & 1 deletion .nojekyll
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c70dd6a3
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25 changes: 25 additions & 0 deletions data/plots.csv
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"plot_id","plot_type"
1,"Spectab exclosure"
2,"Control"
3,"Long-term Krat Exclosure"
4,"Control"
5,"Rodent Exclosure"
6,"Short-term Krat Exclosure"
7,"Rodent Exclosure"
8,"Control"
9,"Spectab exclosure"
10,"Rodent Exclosure"
11,"Control"
12,"Control"
13,"Short-term Krat Exclosure"
14,"Control"
15,"Long-term Krat Exclosure"
16,"Rodent Exclosure"
17,"Control"
18,"Short-term Krat Exclosure"
19,"Long-term Krat Exclosure"
20,"Short-term Krat Exclosure"
21,"Long-term Krat Exclosure"
22,"Control"
23,"Rodent Exclosure"
24,"Rodent Exclosure"
55 changes: 55 additions & 0 deletions data/species.csv
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species_id,genus,species,taxa
AB,Amphispiza,bilineata,Bird
AH,Ammospermophilus,harrisi,Rodent
AS,Ammodramus,savannarum,Bird
BA,Baiomys,taylori,Rodent
CB,Campylorhynchus,brunneicapillus,Bird
CM,Calamospiza,melanocorys,Bird
CQ,Callipepla,squamata,Bird
CS,Crotalus,scutalatus,Reptile
CT,Cnemidophorus,tigris,Reptile
CU,Cnemidophorus,uniparens,Reptile
CV,Crotalus,viridis,Reptile
DM,Dipodomys,merriami,Rodent
DO,Dipodomys,ordii,Rodent
DS,Dipodomys,spectabilis,Rodent
DX,Dipodomys,sp.,Rodent
EO,Eumeces,obsoletus,Reptile
GS,Gambelia,silus,Reptile
NL,Neotoma,albigula,Rodent
NX,Neotoma,sp.,Rodent
OL,Onychomys,leucogaster,Rodent
OT,Onychomys,torridus,Rodent
OX,Onychomys,sp.,Rodent
PB,Chaetodipus,baileyi,Rodent
PC,Pipilo,chlorurus,Bird
PE,Peromyscus,eremicus,Rodent
PF,Perognathus,flavus,Rodent
PG,Pooecetes,gramineus,Bird
PH,Perognathus,hispidus,Rodent
PI,Chaetodipus,intermedius,Rodent
PL,Peromyscus,leucopus,Rodent
PM,Peromyscus,maniculatus,Rodent
PP,Chaetodipus,penicillatus,Rodent
PU,Pipilo,fuscus,Bird
PX,Chaetodipus,sp.,Rodent
RF,Reithrodontomys,fulvescens,Rodent
RM,Reithrodontomys,megalotis,Rodent
RO,Reithrodontomys,montanus,Rodent
RX,Reithrodontomys,sp.,Rodent
SA,Sylvilagus,audubonii,Rabbit
SB,Spizella,breweri,Bird
SC,Sceloporus,clarki,Reptile
SF,Sigmodon,fulviventer,Rodent
SH,Sigmodon,hispidus,Rodent
SO,Sigmodon,ochrognathus,Rodent
SS,Spermophilus,spilosoma,Rodent
ST,Spermophilus,tereticaudus,Rodent
SU,Sceloporus,undulatus,Reptile
SX,Sigmodon,sp.,Rodent
UL,Lizard,sp.,Reptile
UP,Pipilo,sp.,Bird
UR,Rodent,sp.,Rodent
US,Sparrow,sp.,Bird
ZL,Zonotrichia,leucophrys,Bird
ZM,Zenaida,macroura,Bird
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