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Fix README flags #4

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6 changes: 3 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -8,15 +8,15 @@ This option specifies that the ONT native barcodes are being used and only looks

If both these options are used then it doesn't look for middle adapters for reads that were unassigned a barcode (as it will be throwing these away anyway).

> --barcode_headers
> --barcode_labels

This option writes the barcode calls to the header of the output fastq.

> --extended_headers
> --extended_labels

This option also writes the barcode call for both ends of the read and the similarity scores for these matches

> --csv
> --barcode_stats_csv

Writes a CSV file with one row per read giving the barcode call information

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