Merge pull request #10 from artic-network/update_squirrel

update squirrel version
artic-network · Nov 21, 2024 · b05376e · b05376e
2 parents 2d1fea2 + f77d489
commit b05376e
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/modules/squirrel.nf b/modules/squirrel.nf
@@ -2,9 +2,9 @@ process squirrelAlignmentAndQC {
 
     label "process_low"
 
-    container "community.wave.seqera.io/library/squirrel:1.0.10--dc85d171b951f751"
+    container "docker.io/articnetworkorg/squirrel@sha256:6311a61f667fa288b7ede67e88f4b7451e31f8b1da3ac61c5d1c8f303e253591"
 
-    conda "bioconda::squirrel=1.0.10"
+    conda "bioconda::squirrel=1.0.12"
 
     publishDir "${params.outdir}/${task.process.replaceAll(":","_")}", pattern: "squirrel/**", mode: 'copy', saveAs: {  fn -> fn.replace("squirrel/", "")}