Added regenerate to update the info.json infoschema

primal_page/main.py

@@ -18,6 +18,7 @@
     validate_bedfile,
     BEDFILERESULT,
     Collection,
+    INFO_SCHEMA,
 )
 
 
@@ -476,7 +477,7 @@ def primerclass(
         PrimerClass, typer.Argument(help="The primerclass to change to")
     ],
 ):
-    """Append an author to the authors list in the info.json file"""
+    """Change the primerclass field in the info.json"""
 
     info = json.load(schemeinfo.open())
     info = Info(**info)
@@ -814,6 +815,7 @@ def regenerate(
         - Rehashes info.json's primer_bed_md5 and reference_fasta_md5
         - Regenerates the README.md file
         - Recalculate the artic-primerbed version
+        - Updates the infoschema version to current
 
     Ensures work/config.json has no absolute paths
         - Ensures hashes in config.json are removed
@@ -847,6 +849,7 @@ def regenerate(
     info_json["reference_fasta_md5"] = hashfile(scheme_path / "reference.fasta")
 
     info = Info(**info_json)
+    info.infoschema = INFO_SCHEMA
 
     # Get the pngs
     pngs = [path for path in scheme_path.rglob("*.png")]

primal_page/schemas.py

@@ -6,6 +6,8 @@
 import pathlib
 from primalhelper.bedfile import read_bed_file
 
+INFO_SCHEMA = "v1.3.0"
+
 SCHEMENAME_PATTERN = r"^[a-z0-9][a-z0-9-]*[a-z0-9]$"
 VERSION_PATTERN = r"^v\d+\.\d+\.\d+$"
 
@@ -193,7 +195,7 @@ class Info(BaseModel):
     species: Annotated[set[int | str], AfterValidator(not_empty)]
     license: str = "CC BY-SA 4.0"
     primerclass: PrimerClass = PrimerClass.PRIMERSCHEMES
-    infoschema: str = "v1.3.0"
+    infoschema: str = INFO_SCHEMA
     articbedversion: BedfileVersion
     # Add the optional fields
     description: str | None = None