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Getting ready for version 2 #373

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e726e74
usethis::use_readme_rmd()
joethorley Aug 15, 2024
54a7bba
usethis::use_pkgdown_github_pages()
joethorley Aug 15, 2024
0e596e0
update git ignore
joethorley Aug 15, 2024
0e28cba
pkgdown
joethorley Aug 15, 2024
0ec1dad
usethis::use_tidy_style()
joethorley Aug 15, 2024
73208c8
urlchecker::url_check()
joethorley Aug 15, 2024
d9b58dc
usethis::use_testthat(3)
joethorley Aug 15, 2024
c1bf059
Remove check environments section from cran-comments.md
joethorley Aug 15, 2024
d5abf12
Use lifecycle instead of artisanal deprecation messages
joethorley Aug 15, 2024
97f1489
usethis:::use_codecov_badge("poissonconsulting/ssdtools")
joethorley Aug 15, 2024
e541d20
usethis::use_tidy_coc()
joethorley Aug 15, 2024
c38246c
Use pak::pak("poissonconsulting/ssdtools") in README
joethorley Aug 15, 2024
7bb297c
usethis::use_tidy_dependencies() without cli
joethorley Aug 15, 2024
cc67796
edit readme
joethorley Aug 15, 2024
e120423
usethis::use_tidy_description()
joethorley Aug 15, 2024
a21e22e
usethis::use_tidy_github_actions()
joethorley Aug 15, 2024
05a2d9f
check dev
joethorley Aug 15, 2024
0e5e4fe
to dev
joethorley Aug 15, 2024
76c27ee
ssd min pmix
joethorley Aug 15, 2024
2494531
remove '` pkgdown
joethorley Aug 15, 2024
b8f43e1
& to && in if statements
joethorley Aug 15, 2024
f2c3d73
Merge branch 'dev' into upkeep-2024-08
joethorley Aug 15, 2024
9ccb596
Merge pull request #70 from poissonconsulting/upkeep-2024-08
joethorley Aug 15, 2024
7752fed
stable badge
joethorley Aug 15, 2024
c8b1075
Merge branch 'dev' of github.com:poissonconsulting/ssdtools into dev
joethorley Aug 15, 2024
cf82177
test bootstrap with censored data
joethorley Aug 15, 2024
18b951e
test is censored
joethorley Aug 16, 2024
44b83fa
test summary censored
joethorley Aug 16, 2024
ac10bef
remove redundant value
joethorley Aug 16, 2024
763abae
test partial left full censored
joethorley Aug 16, 2024
ebe750f
simplify censor
joethorley Aug 16, 2024
16fad1b
refactor censoring
joethorley Aug 16, 2024
9c85971
- Added `ssd_censor_data()`.
joethorley Aug 17, 2024
2d90026
more censoring tests
joethorley Aug 19, 2024
e52f3fb
- Deprecate `ssd_wqg_bc()` and `ssd_wqg_burrlioz()`.
joethorley Aug 19, 2024
24dab69
move to deprecated functions
joethorley Aug 19, 2024
9d42693
add `ssd_censor_data()` to _pkgdown.yml
joethorley Aug 19, 2024
3c8be89
dist_data example fixed
joethorley Aug 19, 2024
1acea3a
adding old small sample size bias
joethorley Aug 19, 2024
3a5bee5
updating small sample bias
joethorley Aug 19, 2024
73882ce
update devtools helpers
joethorley Aug 19, 2024
0d92828
updating code
joethorley Aug 19, 2024
8dcda58
update small sample bias
joethorley Aug 20, 2024
02408d7
Merge pull request #74 from poissonconsulting/b-censorplot
joethorley Aug 20, 2024
6b0754b
Merge branch 'dev' into deprecate-wqg
joethorley Aug 20, 2024
54ffefa
Merge pull request #75 from poissonconsulting/deprecate-wqg
joethorley Aug 20, 2024
0a29a51
Merge branch 'dev' into f-vignettes
joethorley Aug 20, 2024
5d43390
Merge pull request #79 from poissonconsulting/f-vignettes
joethorley Aug 20, 2024
b301d52
remove small sample bias
joethorley Aug 20, 2024
49f4618
- The optim argument `pgtol` is set to 1e-5 if not specified via the …
joethorley Aug 21, 2024
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- The optim argument pgtol is set to 1e-5 if not specified via the …
…control argument.
joethorley committed Aug 21, 2024
commit 49f46183bcfeb5655867fc22555e88169321ba5d
6 changes: 4 additions & 2 deletions R/devtools-helpers.R
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Copyright 2023 Province of British Columbia
# Copyright 2024 Province of British Columbia
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
@@ -16,6 +16,8 @@ release_questions <- function() {
c(
"Have you confirmed Apache 2.0 license at the top of all code files?",
"Have you confirmed Creative Commons license for all non-code files?",
"Have you rerun `vignettestatic/small-sample-bias.Rmd`?"
"Have you run `data-raw/data-raw.R`?",
"Have you tested using `ssdtests` package?",
"Have you updated `small-sample-bias.pdf` using `ssdtests` package?"
)
}
4 changes: 3 additions & 1 deletion R/fit-burrlioz.R
Original file line number Diff line number Diff line change
@@ -27,12 +27,13 @@
#' @examples
#' ssd_fit_burrlioz(ssddata::ccme_boron)
ssd_fit_burrlioz <- function(data, left = "Conc", rescale = FALSE,
control = list(),
silent = FALSE) {
if (nrow(data) <= 8) {
fit <- ssd_fit_dists(data,
left = left, dists = "llogis",
computable = FALSE, nrow = 5L,
rescale = rescale, silent = silent
rescale = rescale, silent = silent, control = control,
)
class(fit) <- c("fitburrlioz", class(fit))
return(fit)
@@ -46,6 +47,7 @@ ssd_fit_burrlioz <- function(data, left = "Conc", rescale = FALSE,
left = left, dists = "burrIII3",
rescale = rescale, computable = FALSE,
at_boundary_ok = TRUE, silent = TRUE,
control = control,
range_shape1 = range_shape1,
range_shape2 = range_shape2
),
17 changes: 13 additions & 4 deletions R/fit.R
Original file line number Diff line number Diff line change
@@ -139,15 +139,19 @@ fits_dists <- function(data, dists, min_pmix, range_shape1, range_shape2, contro
#'
#' Fits one or more distributions to species sensitivity data.
#'
#' By default the 'llogis', 'gamma' and 'lnorm'
#' distributions are fitted to the data.
#' For a complete list of the implemented distributions see [`ssd_dists_all()`].
#' By default the 'gamma', 'lgumbel', 'llogis', 'lnorm', 'lnorm_lnorm' and
#' 'weibull' distributions are fitted to the data.
#' For a complete list of the distributions that are currently implemented in
#' `ssdtools` see [`ssd_dists_all()`].
#'
#' If weight specifies a column in the data frame with positive numbers,
#' weighted estimation occurs.
#' However, currently only the resultant parameter estimates are available.
#'
#' If the `right` argument is different to the `left` argument then the data are considered to be censored.
#' If the `right` argument is different to the `left` argument
#' then the data are considered to be censored.
#'
#' The optim argument `pgtol` is set to 1e-5 if not specified via the control argument.
#'
#' @inheritParams params
#' @return An object of class fitdists.
@@ -214,6 +218,11 @@ ssd_fit_dists <- function(
if (any(is.infinite(attrs$data$right))) {
err("Distributions cannot currently be fitted to right censored data.")
}

if(!utils::hasName(control, "pgtol")) {
control$pgtol <- 1e-5
}

fits <- fits_dists(attrs$data, dists,
min_pmix = min_pmix, range_shape1 = range_shape1,
range_shape2 = range_shape2,
10 changes: 9 additions & 1 deletion man/ssd_fit_burrlioz.Rd

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12 changes: 8 additions & 4 deletions man/ssd_fit_dists.Rd

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4 changes: 2 additions & 2 deletions tests/testthat/_snaps/gompertz/hc_prob.csv
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
dist,proportion,est,se,lcl,ucl,wt,method,nboot,pboot,samples
average,0.05,0.179453,0.307799,0.0992422,1.23754,1,parametric,100,0.92,"c(`000000001_gompertz` = 0.232668, `000000003_gompertz` = 0.104651, `000000004_gompertz` = 0.546479, `000000005_gompertz` = 0.59723, `000000006_gompertz` = 0.232644, `000000007_gompertz` = 0.26047, `000000008_gompertz` = 0.194946, `000000009_gompertz` = 0.687566, `000000010_gompertz` = 0.158672, `000000011_gompertz` = 0.252489, `000000012_gompertz` = 0.212705, `000000013_gompertz` = 1.32526, `000000014_gompertz` = 0.196413, `000000015_gompertz` = 0.556619, `000000016_gompertz` = 0.542088, `000000017_gompertz` = 0.258851,
`000000018_gompertz` = 0.467362, `000000019_gompertz` = 0.444558, `000000020_gompertz` = 0.252365, `000000021_gompertz` = 1.00627, `000000022_gompertz` = 0.262159, `000000023_gompertz` = 0.201961, `000000024_gompertz` = 0.221781, `000000025_gompertz` = 0.370823, `000000026_gompertz` = 0.381622, `000000027_gompertz` = 0.587692, `000000028_gompertz` = 0.154181, `000000031_gompertz` = 0.10423, `000000032_gompertz` = 0.250053, `000000033_gompertz` = 0.462225, `000000034_gompertz` = 0.39652, `000000035_gompertz` = 0,
`000000018_gompertz` = 0.467362, `000000019_gompertz` = 0.444558, `000000020_gompertz` = 0.252366, `000000021_gompertz` = 1.00627, `000000022_gompertz` = 0.262159, `000000023_gompertz` = 0.201961, `000000024_gompertz` = 0.221781, `000000025_gompertz` = 0.370823, `000000026_gompertz` = 0.381622, `000000027_gompertz` = 0.587692, `000000028_gompertz` = 0.154181, `000000031_gompertz` = 0.10423, `000000032_gompertz` = 0.250053, `000000033_gompertz` = 0.462225, `000000034_gompertz` = 0.39652, `000000035_gompertz` = 0,
`000000036_gompertz` = 0.258822, `000000037_gompertz` = 0.242274, `000000038_gompertz` = 0.347614, `000000039_gompertz` = 0.29439, `000000040_gompertz` = 1.14346, `000000041_gompertz` = 0.135087, `000000042_gompertz` = 0.119971, `000000043_gompertz` = 0.314016, `000000044_gompertz` = 0.0979661, `000000045_gompertz` = 0.135296, `000000046_gompertz` = 0.260949, `000000047_gompertz` = 0.50742, `000000049_gompertz` = 1.83785, `000000050_gompertz` = 0.183739, `000000051_gompertz` = 0.119605, `000000052_gompertz` = 0.166286,
`000000053_gompertz` = 0.375928, `000000054_gompertz` = 0.16, `000000055_gompertz` = 0.378692, `000000056_gompertz` = 0.198193, `000000057_gompertz` = 0.854231, `000000058_gompertz` = 0.113677, `000000059_gompertz` = 0.0460489, `000000060_gompertz` = 0.26119, `000000061_gompertz` = 0.349783, `000000062_gompertz` = 0.155674, `000000063_gompertz` = 0.25708, `000000065_gompertz` = 0.862409, `000000066_gompertz` = 0.252748, `000000067_gompertz` = 1.27322, `000000068_gompertz` = 0.30646, `000000069_gompertz` = 0.102607,
`000000053_gompertz` = 0.375928, `000000054_gompertz` = 0.16, `000000055_gompertz` = 0.378693, `000000056_gompertz` = 0.198193, `000000057_gompertz` = 0.854231, `000000058_gompertz` = 0.113677, `000000059_gompertz` = 0.0460489, `000000060_gompertz` = 0.26119, `000000061_gompertz` = 0.349783, `000000062_gompertz` = 0.155674, `000000063_gompertz` = 0.25708, `000000065_gompertz` = 0.862409, `000000066_gompertz` = 0.252748, `000000067_gompertz` = 1.27322, `000000068_gompertz` = 0.306461, `000000069_gompertz` = 0.102607,
`000000071_gompertz` = 0.882485, `000000072_gompertz` = 0.738937, `000000074_gompertz` = 0.2907, `000000075_gompertz` = 0.428083, `000000076_gompertz` = 0.325723, `000000077_gompertz` = 0.260432, `000000078_gompertz` = 0.331494, `000000079_gompertz` = 1.0526, `000000080_gompertz` = 0.616152, `000000081_gompertz` = 0.183109, `000000082_gompertz` = 0.184165, `000000083_gompertz` = 0.141392, `000000084_gompertz` = 0.324602, `000000085_gompertz` = 0.366267, `000000086_gompertz` = 0.672032, `000000087_gompertz` = 0.274923,
`000000088_gompertz` = 0.283306, `000000089_gompertz` = 0.252262, `000000090_gompertz` = 0.244424, `000000091_gompertz` = 0.109766, `000000092_gompertz` = 0.192248, `000000093_gompertz` = 0.156249, `000000094_gompertz` = 0.392504, `000000095_gompertz` = 0.171986, `000000096_gompertz` = 0.217738, `000000097_gompertz` = 0.548714, `000000098_gompertz` = 0.431485, `000000100_gompertz` = 0.298434)"
2 changes: 1 addition & 1 deletion tests/testthat/_snaps/hc/fullyleft.csv
Original file line number Diff line number Diff line change
@@ -1,2 +1,2 @@
dist,proportion,est,se,lcl,ucl,wt,method,nboot,pboot,samples
average,0.05,0.0276016,0,0.0457802,0.0457802,1,parametric,10,1,numeric(0)
average,0.05,0.0267647,0,0.0462203,0.0462203,1,parametric,10,1,numeric(0)
4 changes: 2 additions & 2 deletions tests/testthat/_snaps/hc/hc_cis.csv
Original file line number Diff line number Diff line change
@@ -16,7 +16,7 @@ average,0.05,1.68118,0.682856,0.916053,3.47924,1,parametric,1000,1,"c(`000000001
`000000253_lnorm` = 0.957097, `000000254_lnorm` = 1.71972, `000000255_lnorm` = 1.246, `000000256_lnorm` = 1.64064, `000000257_lnorm` = 1.85754, `000000258_lnorm` = 2.32517, `000000259_lnorm` = 1.53654, `000000260_lnorm` = 4.93482, `000000261_lnorm` = 2.92566, `000000262_lnorm` = 1.80187, `000000263_lnorm` = 1.30003, `000000264_lnorm` = 3.32539, `000000265_lnorm` = 1.00911, `000000266_lnorm` = 1.3714, `000000267_lnorm` = 1.49066, `000000268_lnorm` = 1.16181, `000000269_lnorm` = 2.17011, `000000270_lnorm` = 1.93628,
`000000271_lnorm` = 1.93382, `000000272_lnorm` = 1.56229, `000000273_lnorm` = 1.934, `000000274_lnorm` = 1.48945, `000000275_lnorm` = 1.5608, `000000276_lnorm` = 2.76426, `000000277_lnorm` = 1.41112, `000000278_lnorm` = 3.0299, `000000279_lnorm` = 1.20218, `000000280_lnorm` = 1.17921, `000000281_lnorm` = 3.31634, `000000282_lnorm` = 2.2934, `000000283_lnorm` = 1.75066, `000000284_lnorm` = 2.23803, `000000285_lnorm` = 1.73284, `000000286_lnorm` = 2.27553, `000000287_lnorm` = 1.06919, `000000288_lnorm` = 2.22348,
`000000289_lnorm` = 1.43162, `000000290_lnorm` = 2.38861, `000000291_lnorm` = 1.9776, `000000292_lnorm` = 1.75615, `000000293_lnorm` = 1.51279, `000000294_lnorm` = 4.17684, `000000295_lnorm` = 1.10022, `000000296_lnorm` = 3.42715, `000000297_lnorm` = 1.28569, `000000298_lnorm` = 1.91589, `000000299_lnorm` = 1.14508, `000000300_lnorm` = 1.36318, `000000301_lnorm` = 1.23333, `000000302_lnorm` = 1.07115, `000000303_lnorm` = 1.85, `000000304_lnorm` = 2.22285, `000000305_lnorm` = 1.22099, `000000306_lnorm` = 0.769899,
`000000307_lnorm` = 2.26783, `000000308_lnorm` = 2.76718, `000000309_lnorm` = 2.80311, `000000310_lnorm` = 1.7925, `000000311_lnorm` = 1.50201, `000000312_lnorm` = 2.33447, `000000313_lnorm` = 1.51844, `000000314_lnorm` = 1.49481, `000000315_lnorm` = 2.28878, `000000316_lnorm` = 2.50457, `000000317_lnorm` = 1.49334, `000000318_lnorm` = 1.2303, `000000319_lnorm` = 2.97667, `000000320_lnorm` = 2.11936, `000000321_lnorm` = 1.49001, `000000322_lnorm` = 1.68884, `000000323_lnorm` = 1.43209, `000000324_lnorm` = 1.93249,
`000000307_lnorm` = 2.26783, `000000308_lnorm` = 2.76718, `000000309_lnorm` = 2.80311, `000000310_lnorm` = 1.7925, `000000311_lnorm` = 1.50201, `000000312_lnorm` = 2.33447, `000000313_lnorm` = 1.51844, `000000314_lnorm` = 1.49481, `000000315_lnorm` = 2.28877, `000000316_lnorm` = 2.50457, `000000317_lnorm` = 1.49334, `000000318_lnorm` = 1.2303, `000000319_lnorm` = 2.97667, `000000320_lnorm` = 2.11936, `000000321_lnorm` = 1.49001, `000000322_lnorm` = 1.68884, `000000323_lnorm` = 1.43209, `000000324_lnorm` = 1.93249,
`000000325_lnorm` = 1.48784, `000000326_lnorm` = 2.98808, `000000327_lnorm` = 2.30993, `000000328_lnorm` = 2.99877, `000000329_lnorm` = 1.741, `000000330_lnorm` = 1.88757, `000000331_lnorm` = 2.04144, `000000332_lnorm` = 1.25144, `000000333_lnorm` = 1.57907, `000000334_lnorm` = 1.00788, `000000335_lnorm` = 1.2126, `000000336_lnorm` = 1.9552, `000000337_lnorm` = 2.82747, `000000338_lnorm` = 1.90187, `000000339_lnorm` = 1.42327, `000000340_lnorm` = 1.43656, `000000341_lnorm` = 1.09695, `000000342_lnorm` = 1.33248,
`000000343_lnorm` = 1.19027, `000000344_lnorm` = 1.97184, `000000345_lnorm` = 1.77387, `000000346_lnorm` = 1.07525, `000000347_lnorm` = 2.13797, `000000348_lnorm` = 2.16009, `000000349_lnorm` = 2.2232, `000000350_lnorm` = 2.71378, `000000351_lnorm` = 1.83288, `000000352_lnorm` = 2.48059, `000000353_lnorm` = 1.04259, `000000354_lnorm` = 1.55659, `000000355_lnorm` = 2.4289, `000000356_lnorm` = 3.13694, `000000357_lnorm` = 1.00274, `000000358_lnorm` = 1.32141, `000000359_lnorm` = 1.9265, `000000360_lnorm` = 1.34318,
`000000361_lnorm` = 1.42568, `000000362_lnorm` = 1.01439, `000000363_lnorm` = 1.49849, `000000364_lnorm` = 2.22677, `000000365_lnorm` = 1.62129, `000000366_lnorm` = 2.04696, `000000367_lnorm` = 1.18602, `000000368_lnorm` = 1.20377, `000000369_lnorm` = 1.2206, `000000370_lnorm` = 1.90947, `000000371_lnorm` = 1.13543, `000000372_lnorm` = 1.6593, `000000373_lnorm` = 1.46798, `000000374_lnorm` = 1.57448, `000000375_lnorm` = 1.85693, `000000376_lnorm` = 1.4851, `000000377_lnorm` = 1.42378, `000000378_lnorm` = 1.59598,
@@ -46,7 +46,7 @@ average,0.05,1.68118,0.682856,0.916053,3.47924,1,parametric,1000,1,"c(`000000001
`000000793_lnorm` = 1.38939, `000000794_lnorm` = 1.73823, `000000795_lnorm` = 1.93236, `000000796_lnorm` = 2.27247, `000000797_lnorm` = 1.9506, `000000798_lnorm` = 2.79071, `000000799_lnorm` = 1.85945, `000000800_lnorm` = 1.697, `000000801_lnorm` = 1.20041, `000000802_lnorm` = 2.30994, `000000803_lnorm` = 2.28004, `000000804_lnorm` = 2.12277, `000000805_lnorm` = 1.40852, `000000806_lnorm` = 2.70247, `000000807_lnorm` = 0.952191, `000000808_lnorm` = 1.76159, `000000809_lnorm` = 1.55078, `000000810_lnorm` = 1.46163,
`000000811_lnorm` = 2.11149, `000000812_lnorm` = 1.11352, `000000813_lnorm` = 2.7389, `000000814_lnorm` = 1.51083, `000000815_lnorm` = 1.2664, `000000816_lnorm` = 1.60513, `000000817_lnorm` = 1.05833, `000000818_lnorm` = 1.68812, `000000819_lnorm` = 2.66027, `000000820_lnorm` = 1.65418, `000000821_lnorm` = 1.08778, `000000822_lnorm` = 1.33578, `000000823_lnorm` = 1.09943, `000000824_lnorm` = 1.50982, `000000825_lnorm` = 1.619, `000000826_lnorm` = 2.30469, `000000827_lnorm` = 0.855125, `000000828_lnorm` = 2.42884,
`000000829_lnorm` = 1.38089, `000000830_lnorm` = 4.4522, `000000831_lnorm` = 1.66964, `000000832_lnorm` = 1.85568, `000000833_lnorm` = 1.08886, `000000834_lnorm` = 0.921413, `000000835_lnorm` = 1.46622, `000000836_lnorm` = 2.73844, `000000837_lnorm` = 1.58314, `000000838_lnorm` = 1.38034, `000000839_lnorm` = 4.41954, `000000840_lnorm` = 0.943256, `000000841_lnorm` = 2.27984, `000000842_lnorm` = 0.912846, `000000843_lnorm` = 3.55196, `000000844_lnorm` = 1.1334, `000000845_lnorm` = 1.32162, `000000846_lnorm` = 1.15393,
`000000847_lnorm` = 1.98562, `000000848_lnorm` = 2.20511, `000000849_lnorm` = 1.54514, `000000850_lnorm` = 2.42929, `000000851_lnorm` = 4.14374, `000000852_lnorm` = 1.43422, `000000853_lnorm` = 1.86874, `000000854_lnorm` = 2.12603, `000000855_lnorm` = 1.61319, `000000856_lnorm` = 2.90886, `000000857_lnorm` = 1.78374, `000000858_lnorm` = 2.71821, `000000859_lnorm` = 2.36495, `000000860_lnorm` = 1.34749, `000000861_lnorm` = 2.34658, `000000862_lnorm` = 1.52777, `000000863_lnorm` = 0.600718, `000000864_lnorm` = 1.09026,
`000000847_lnorm` = 1.98562, `000000848_lnorm` = 2.20511, `000000849_lnorm` = 1.54514, `000000850_lnorm` = 2.42929, `000000851_lnorm` = 4.14374, `000000852_lnorm` = 1.43422, `000000853_lnorm` = 1.86874, `000000854_lnorm` = 2.12603, `000000855_lnorm` = 1.61319, `000000856_lnorm` = 2.90886, `000000857_lnorm` = 1.78374, `000000858_lnorm` = 2.71821, `000000859_lnorm` = 2.36495, `000000860_lnorm` = 1.34749, `000000861_lnorm` = 2.34658, `000000862_lnorm` = 1.52777, `000000863_lnorm` = 0.600719, `000000864_lnorm` = 1.09026,
`000000865_lnorm` = 2.03663, `000000866_lnorm` = 1.49139, `000000867_lnorm` = 1.12194, `000000868_lnorm` = 1.07614, `000000869_lnorm` = 1.8528, `000000870_lnorm` = 2.95831, `000000871_lnorm` = 2.98388, `000000872_lnorm` = 2.99172, `000000873_lnorm` = 2.63005, `000000874_lnorm` = 2.71377, `000000875_lnorm` = 2.88341, `000000876_lnorm` = 1.53379, `000000877_lnorm` = 1.38716, `000000878_lnorm` = 1.82626, `000000879_lnorm` = 2.14879, `000000880_lnorm` = 1.45224, `000000881_lnorm` = 2.03255, `000000882_lnorm` = 1.23025,
`000000883_lnorm` = 4.04123, `000000884_lnorm` = 1.87984, `000000885_lnorm` = 0.920501, `000000886_lnorm` = 1.39447, `000000887_lnorm` = 2.25379, `000000888_lnorm` = 1.17532, `000000889_lnorm` = 1.54539, `000000890_lnorm` = 1.16774, `000000891_lnorm` = 1.62573, `000000892_lnorm` = 0.973674, `000000893_lnorm` = 1.10345, `000000894_lnorm` = 1.55087, `000000895_lnorm` = 1.43027, `000000896_lnorm` = 0.962508, `000000897_lnorm` = 2.10172, `000000898_lnorm` = 1.45381, `000000899_lnorm` = 2.50912, `000000900_lnorm` = 0.829115,
`000000901_lnorm` = 1.49204, `000000902_lnorm` = 1.97533, `000000903_lnorm` = 1.08147, `000000904_lnorm` = 1.12325, `000000905_lnorm` = 1.646, `000000906_lnorm` = 0.996106, `000000907_lnorm` = 3.10322, `000000908_lnorm` = 1.11549, `000000909_lnorm` = 1.86724, `000000910_lnorm` = 1.93593, `000000911_lnorm` = 0.86112, `000000912_lnorm` = 2.97445, `000000913_lnorm` = 2.62286, `000000914_lnorm` = 3.12933, `000000915_lnorm` = 1.27296, `000000916_lnorm` = 1.42102, `000000917_lnorm` = 1.6307, `000000918_lnorm` = 3.45913,
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