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joncison committed May 14, 2020
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51 changes: 51 additions & 0 deletions api_usage_guide.rst
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Expand Up @@ -1530,6 +1530,57 @@ Allowed values (see `Curators Guide <http://biotools.readthedocs.io/en/latest/cu
.. note::
- see the `curation guidelines <http://biotools.readthedocs.io/en/latest/curators_guide.html#elixir-node>`_.




ELIXIR community
----------------
*ELIXIR (or other) community to which the software is relevant.*

Attribute name
elixirCommunity

Required
No

Cardinality
0 to many

Type
ENUM (list)

Allowed values (see `Curators Guide <http://biotools.readthedocs.io/en/latest/curators_guide.html#elixir-community>`_)

- ``3D-BioInfo``
- ``Federated Human Data``
- ``Galaxy``
- ``Human Copy Number Variation``
- ``Intrinsically Disordered Proteins``
- ``Marine Metagenomics``
- ``Metabolomics``
- ``Microbial Biotechnology``
- ``Plant Sciences``
- ``Proteomics``
- ``Rare Diseases``

**Example**

.. code-block:: js
# XML
<elixirCommunity>Galaxy</elixirCommunity>
<elixirCommunity>Metabolomics</elixirCommunity>
# JSON
"elixirCommunity":
[
"Galaxy",
"Metabolomics"
]
.. note::
- see the `curation guidelines <http://biotools.readthedocs.io/en/latest/curators_guide.html#elixir-community>`_.



Link
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2 changes: 1 addition & 1 deletion community_specific_guidelines.rst
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Expand Up @@ -328,7 +328,7 @@ In the *Labels* tab you specify miscellaneous scientific, technical and administ
You can use **Collection** to assign tools which are somehow related to one or more groups. These collections can have any names you like. Other ways to group tools are by creating a *bio.tools* subdomain (from *Menu...Manage subdomains*) and by defining `relations <https://biotools.readthedocs.io/en/latest/curators_guide.html#relation-group>`_ between tools.

.. note::
**ELIXIRNode** and **ELIXIRPlatform** define the name of an ELIXIR node or ELIXIR platform, respectively, that is credited for the tool. All tools in the IFB catalogue will have the ELIXIRNode credit set to "France". These are not normally be set by *bio.tools* users {`learn more <http://biotools.readthedocs.io/en/latest/curators_guide.html#elixir-node>`_}.
**ELIXIRNode** and **ELIXIRPlatform** define the name of an ELIXIR node or ELIXIR platform, respectively, that is credited for the tool. All tools in the IFB catalogue will have the ELIXIRNode credit set to "France". These are not normally be set by *bio.tools* users {`learn more <http://biotools.readthedocs.io/en/latest/curators_guide.html#elixir-node>`_}. **ELXIRCommunity** defines a community (ELIXIR or otherwise) to which the resource is directly relevant - you can select as many as you wish.


Tool type
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23 changes: 22 additions & 1 deletion curators_guide.rst
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Expand Up @@ -666,7 +666,28 @@ ELIXIR Node
"UK"



ELIXIR Community
................
*Name of relevant ELIXIR (or other) community, e.g. "Galaxy"*

- **1.** **MAY** cite any ELIXIR Community to which the software is directly relevant.

.. csv-table::
:header: "ELIXIR Node"
:widths: 25

"3D-BioInfo"
"Federated Human Data"
"Galaxy"
"Human Copy Number Variation"
"Intrinsically Disordered Proteins"
"Marine Metagenomics"
"Metabolomics"
"Microbial Biotechnology"
"Plant Sciences"
"Proteomics"
"Rare Diseases"


Link group
^^^^^^^^^^^
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