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denovo-db parser initial commit #30

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@jeonbr jeonbr commented Aug 3, 2017

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labmed and others added 11 commits August 3, 2017 16:36
convert rsid to "rs"+number, remove rsid if "0"
transcript, remove it if "none"
codingdnasize, remove it if "-1"
functionalclass remove none and blank
clean up all annotation columns
rewrite for loop into a generator.
         polyphen(hdiv), polyphen(hvar) -> polyphen_hdiv, polyphen_hvar
         polyphen(hdiv), polyphen(hvar) -> polyphen_hdiv, polyphen_hvar
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