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Setup GitHub actions cmd check and code coverage #14

Setup GitHub actions cmd check and code coverage

Setup GitHub actions cmd check and code coverage #14

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
workflow_dispatch:
name: R-CMD-check.yaml
permissions: read-all
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck reticulate
needs: check
- uses: actions/setup-python@v4
with:
python-version: "3.11"
# - name: setup r-birdnet venv
# shell: Rscript {0}
# run: |
# path_to_python <- reticulate::virtualenv_create(
# envname = "r-birdnet",
# python = Sys.which("python"), # placed on PATH by the setup-python action
# packages = c(
# "numpy", "pandas"
# )
# )
# writeLines(sprintf("RETICULATE_PYTHON=%s", path_to_python),
# Sys.getenv("GITHUB_ENV"))
- name: setup r-birdnet venv and install birdnet
shell: Rscript {0}
run: |
reticulate::install_python("3.11")
reticulate::virtualenv_create(envname = "r-birdnet",
version = "3.11")
reticulate::use_virtualenv("r-birdnet")
install.packages("devtools")
library(devtools)
devtools::load_all()
birdnetR::install_birdnet()
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'