Setup GitHub actions cmd check and code coverage #14
Workflow file for this run
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [main, master] | |
pull_request: | |
branches: [main, master] | |
workflow_dispatch: | |
name: R-CMD-check.yaml | |
permissions: read-all | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macos-latest, r: 'release'} | |
- {os: windows-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
- {os: ubuntu-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'oldrel-1'} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_KEEP_PKG_SOURCE: yes | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::rcmdcheck reticulate | |
needs: check | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: "3.11" | |
# - name: setup r-birdnet venv | |
# shell: Rscript {0} | |
# run: | | |
# path_to_python <- reticulate::virtualenv_create( | |
# envname = "r-birdnet", | |
# python = Sys.which("python"), # placed on PATH by the setup-python action | |
# packages = c( | |
# "numpy", "pandas" | |
# ) | |
# ) | |
# writeLines(sprintf("RETICULATE_PYTHON=%s", path_to_python), | |
# Sys.getenv("GITHUB_ENV")) | |
- name: setup r-birdnet venv and install birdnet | |
shell: Rscript {0} | |
run: | | |
reticulate::install_python("3.11") | |
reticulate::virtualenv_create(envname = "r-birdnet", | |
version = "3.11") | |
reticulate::use_virtualenv("r-birdnet") | |
install.packages("devtools") | |
library(devtools) | |
devtools::load_all() | |
birdnetR::install_birdnet() | |
- uses: r-lib/actions/check-r-package@v2 | |
with: | |
upload-snapshots: true | |
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' | |