Parse barcodes from read IDs in demultiplexed mode #26
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
If a file has no associated barcode, attempt to parse one from the read ID instead.
mtomko
force-pushed
the
undetermined-barcodes
branch
from
6a1cd1a
to
f1de141
Compare
tmgreen
reviewed
Oct 30, 2023
src/test/scala/org/broadinstitute/gpp/poolq3/barcode/DmuxedBarcodeSourceTest.scala
Show resolved
Hide resolved
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
If a file has no barcodes associated, attempt to parse a barcode from the read IDs.