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testing pr - Np jw test illumina genotyping arrays #847

testing pr - Np jw test illumina genotyping arrays

testing pr - Np jw test illumina genotyping arrays #847

name: WARP Validate Version
# Controls when the workflow will run
on:
pull_request:
#runs on PRs to develop, staging, and master
branches: [ "develop", "staging", "master"]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
env:
PROJECT_NAME: WARP
# Github repo name
REPOSITORY_NAME: ${{ github.event.repository.name }}
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
validate-versions:
runs-on: ubuntu-latest
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v3
with:
fetch-depth: 0 # Fetch all history for all tags and branches
- name: Check working directory
run: |
echo "Current directory: "
pwd
ls -lht
- name: Set up Git
run: |
git fetch --all
- name: Validate versions
id: validate_script
run: |
set -e
echo "Validating all versions for all pipelines..."
result=$(scripts/validate_release.sh -g origin/staging 2>&1 || echo "validation_failed") # don't exit on script failure
# Escape newlines, carriage returns, and percent signs
escaped_result=$(echo "$result" | sed ':a;N;$!ba;s/\r/\\r/g;s/\n/\\n/g;s/%/%%/g')
echo "result=$escaped_result" >> $GITHUB_OUTPUT
- name: Post validation results as a comment
if: always() # This ensures it runs regardless of previous step success/failure
uses: actions/github-script@v7
with:
github-token: ${{ secrets.GITHUB_TOKEN }}
script: |
try {
const output = "${{ steps.validate_script.outputs.result }}".replace(/\\n/g, '\n').replace(/\\r/g, '\r');
const issue_number = context.payload.pull_request.number;
const message = `### 🔍Version Validation Results:\n\`\`\`\n${output}\n\`\`\``;
github.rest.issues.createComment({
owner: context.repo.owner,
repo: context.repo.repo,
issue_number: issue_number,
body: message
});
} catch (error) {
console.error('Failed to post comment:', error);
}
- name: Fail if validation failed
if: contains(steps.validate_script.outputs.result, 'validation_failed')
run: exit 1