To scvi tools

requirements.txt

@@ -2,7 +2,7 @@ ConfigArgParse
 pandas
 seaborn
 tqdm
-scvi==0.6.7
+scvi-tools
 leidenalg
 torch
 scanpy

setup.py

@@ -3,38 +3,36 @@
 from setuptools import setup, find_packages
 
 if sys.version_info < (3,):
-    sys.exit('solo requires Python >= 3.6')
+    sys.exit("solo requires Python >= 3.6")
 
 try:
     from solo import __author__, __email__
 except ImportError:  # Deps not yet installed
-    __author__ = __email__ = ''
+    __author__ = __email__ = ""
 
 
 setup(
-    name='solo-sc',
-    version='0.6',
-    description='Neural network classifiers for doublets',
-    long_description=Path('README.md').read_text('utf-8'),
+    name="solo-sc",
+    version="0.6",
+    description="Neural network classifiers for doublets",
+    long_description=Path("README.md").read_text("utf-8"),
     long_description_content_type="text/markdown",
-    url='http://github.com/calico/solo',
-    download_url='https://github.com/calico/solo/archive/0.1.tar.gz',
+    url="http://github.com/calico/solo",
+    download_url="https://github.com/calico/solo/archive/0.1.tar.gz",
     author=__author__,
     author_email=__email__,
-    license='Apache',
-    python_requires='>=3.6',
+    license="Apache",
+    python_requires=">=3.6",
     install_requires=[
-        l.strip() for l in
-        Path('requirements.txt').read_text('utf-8').splitlines()
-        ],
+        l.strip() for l in Path("requirements.txt").read_text("utf-8").splitlines()
+    ],
     packages=find_packages(),
     entry_points=dict(
-        console_scripts=['solo=solo.solo:main',
-                         'hashsolo=solo.hashsolo:main'],
+        console_scripts=["solo=solo.solo:main", "hashsolo=solo.hashsolo:main"],
     ),
     classifiers=[
-        'Environment :: Console',
-        'Intended Audience :: Science/Research',
-        'Topic :: Scientific/Engineering :: Bio-Informatics',
+        "Environment :: Console",
+        "Intended Audience :: Science/Research",
+        "Topic :: Scientific/Engineering :: Bio-Informatics",
     ],
 )

solo/__init__.py

@@ -1,5 +1,5 @@
-__author__ = 'David Kelley, Nick Bernstein'
-__email__ = '[email protected]'
-__version__ = '0.1'
+__author__ = "David Kelley, Nick Bernstein"
+__email__ = "[email protected]"
+__version__ = "0.1"
 
 from . import hashsolo, utils