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Merge pull request #75 from gregcaporaso/issue-73
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This should address issue #73
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wasade committed Jan 25, 2013
2 parents 20f6593 + b012e5f commit 1d69ff8
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8 changes: 7 additions & 1 deletion README.md
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qiime_test_data
===============

Test input and output for QIIME scripts.
Test input and output for QIIME scripts. To learn how to use this see the [QIIME documentation here](http://qiime.org/developer/script_testing.html). You can also call:

```
python qiime_test_data/script_usage_tests.py
```

for details on running the QIIME script usage tests directly (i.e., not through ``Qiime/tests/all_tests.py``).
4 changes: 2 additions & 2 deletions script_usage_tests.py
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script_info['brief_description'] = ""
script_info['script_description'] = ""
script_info['script_usage'] = []
script_info['script_usage'].append(("Run a subset of the interface tests in verbose mode","Run interface tests for the add_taxa.py and make_otu_table.py scripts. This illustrates how to run from the qiime_test_dir directory.","%prog -i $PWD/ -l $HOME/qime_script_tests.log -t add_taxa,make_otu_table -v"))
script_info['script_usage'].append(("Run all of the interface tests","Run all script interface tests. This illustrates how to run from the qiime_test_dir directory.","%prog -i $PWD/ -l $HOME/all_qime_script_tests.log"))
script_info['script_usage'].append(("Run a subset of the interface tests in verbose mode","Run interface tests for the count_seqs.py and make_otu_table.py scripts. This illustrates how to run from the qiime_test_dir directory.","%prog -t count_seqs,make_otu_table -v"))
script_info['script_usage'].append(("Run all of the interface tests","Run all script interface tests. This illustrates how to run from the qiime_test_dir directory.","%prog"))
script_info['output_description']= ""
script_info['required_options'] = []

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