2024-10-15 update : fixing hosp only model return & docs.

cbernalz · Oct 15, 2024 · 4e4f356 · 4e4f356
1 parent 413235a
commit 4e4f356
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diff --git a/docs/src/index.md b/docs/src/index.md
@@ -22,5 +22,5 @@ To install UCIWWEIHR.jl, you can use the Julia package manager. Open the Julia R
 
 ```julia
 using Pkg
-Pkg.add("git@github.com:cbernalz/UCIWWEIHR.jl.git")
+Pkg.add("https://github.com/cbernalz/UCIWWEIHR.jl.git")
 ```
diff --git a/docs/src/tutorials/getting_started.md b/docs/src/tutorials/getting_started.md
@@ -8,7 +8,7 @@ To install the UCIWWEIHR.jl package, open the Julia REPL and run the following c
 
 ``` julia
 using Pkg
-Pkg.add("git@github.com:cbernalz/UCIWWEIHR.jl.git")
+Pkg.add("https://github.com/cbernalz/UCIWWEIHR.jl.git")
 ```
 
 

diff --git a/src/uciwweihr_model.jl b/src/uciwweihr_model.jl
@@ -252,7 +252,6 @@ The defaults for this fuction will follow those of the default simulation in gen
             return
         end
         sol_array = Array(sol)
-        I_comp_sol = clamp.(sol_array[2,2:end],1, 1e10)
 
 
         # Likelihood calculations------------
@@ -278,7 +277,7 @@ The defaults for this fuction will follow those of the default simulation in gen
             epsilon = epsilon,
             rt_vals = rt_vals,
             sigma_hosp = sigma_hosp,
-            H = H_comp,
+            H = sol_hosp,
             rt_init = rt_init,
             w_init = w_init
         )