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{"documenter":{"julia_version":"1.9.4","generation_timestamp":"2024-10-22T22:26:15","documenter_version":"1.7.0"}}
{"documenter":{"julia_version":"1.9.4","generation_timestamp":"2024-10-23T00:48:40","documenter_version":"1.7.0"}}
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<!DOCTYPE html>
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>HOME · UCIWWEIHR.jl</title><meta name="title" content="HOME · UCIWWEIHR.jl"/><meta property="og:title" content="HOME · UCIWWEIHR.jl"/><meta property="twitter:title" content="HOME · UCIWWEIHR.jl"/><meta name="description" content="Documentation for UCIWWEIHR.jl."/><meta property="og:description" content="Documentation for UCIWWEIHR.jl."/><meta property="twitter:description" content="Documentation for UCIWWEIHR.jl."/><script data-outdated-warner src="assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/juliamono/0.050/juliamono.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/fontawesome.min.css" rel="stylesheet" type="text/css"/><link 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href="assets/themes/catppuccin-frappe.css" data-theme-name="catppuccin-frappe"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/catppuccin-latte.css" data-theme-name="catppuccin-latte"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-dark.css" data-theme-name="documenter-dark" data-theme-primary-dark/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href>UCIWWEIHR.jl</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>HOME</a><ul class="internal"><li><a class="tocitem" href="#Introduction"><span>Introduction</span></a></li><li><a class="tocitem" href="#Features"><span>Features</span></a></li><li><a class="tocitem" href="#Installation"><span>Installation</span></a></li></ul></li><li><span class="tocitem">TUTORIALS</span><ul><li><a class="tocitem" href="tutorial_index/">TUTORIAL CONTENTS</a></li><li><a class="tocitem" href="tutorials/getting_started/">GETTING STARTED</a></li><li><a class="tocitem" href="tutorials/uciwweihr_simulation_data/">UCIWWEIHR SIMULATION DATA</a></li><li><a class="tocitem" href="tutorials/agent_based_simulation_data/">AGENT-BASED SIMULATION DATA</a></li><li><a class="tocitem" href="tutorials/uciwwiehr_model_fitting_no_forecast/">UCIWWEIHR FITTING MODEL W/OUT FORECASTING</a></li><li><a class="tocitem" href="tutorials/uciwwiehr_model_fitting_forecast/">UCIWWEIHR FITTING MODEL W/ FORECASTING</a></li><li><a class="tocitem" href="tutorials/uciwweihr_model_repeated_forecasts/">UCIWWEIHR REPEATED FORECASTING</a></li></ul></li><li><a class="tocitem" href="reference/">REFERENCE</a></li><li><a class="tocitem" href="license/">LICENSE</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>HOME</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>HOME</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://cbernalz.github.io/UCIWWEIHR.jl" title="View the repository on GitHub"><span class="docs-icon fa-brands"></span><span class="docs-label is-hidden-touch">GitHub</span></a><a class="docs-navbar-link" href="https://github.com/cbernalz/UCIWWEIHR.jl/blob/master/docs/src/index.md#" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="UCIWWEIHR.jl"><a class="docs-heading-anchor" href="#UCIWWEIHR.jl">UCIWWEIHR.jl</a><a id="UCIWWEIHR.jl-1"></a><a class="docs-heading-anchor-permalink" href="#UCIWWEIHR.jl" title="Permalink"></a></h1><p>Welcome to the UCIWWEIHR.jl package documentation! CURRENTLY UNDER DEVELOPMENT!!!</p><p>By : Christian O. Bernal Zelaya &amp; Volodymyr M. Minin.</p><h2 id="Introduction"><a class="docs-heading-anchor" href="#Introduction">Introduction</a><a id="Introduction-1"></a><a class="docs-heading-anchor-permalink" href="#Introduction" title="Permalink"></a></h2><p>UCIWWEIHR.jl is a Julia package for forecasting and nowcasting COVID-19 hospitalizations using pathogen genome concentrations. <a href="license/#license">UCIWWEIHR.jl Package License</a></p><h2 id="Features"><a class="docs-heading-anchor" href="#Features">Features</a><a id="Features-1"></a><a class="docs-heading-anchor-permalink" href="#Features" title="Permalink"></a></h2><ul><li>Comprehensive library of Bayesian models</li><li>Simulation of infectious disease </li><li>Model calibration</li><li>Sensitivity analysis and uncertainty quantification?</li><li>Visualization of results and MCMC evaluations(live?)</li></ul><h2 id="Installation"><a class="docs-heading-anchor" href="#Installation">Installation</a><a id="Installation-1"></a><a class="docs-heading-anchor-permalink" href="#Installation" title="Permalink"></a></h2><p>To install UCIWWEIHR.jl, you can use the Julia package manager. Open the Julia REPL and run the following command:</p><pre><code class="language-julia hljs">using Pkg
Pkg.add(&quot;https://github.com/cbernalz/UCIWWEIHR.jl.git&quot;)</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="tutorial_index/">TUTORIAL CONTENTS »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Tuesday 22 October 2024 22:26">Tuesday 22 October 2024</span>. Using Julia version 1.9.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
Pkg.add(&quot;https://github.com/cbernalz/UCIWWEIHR.jl.git&quot;)</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="tutorial_index/">TUTORIAL CONTENTS »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Wednesday 23 October 2024 00:48">Wednesday 23 October 2024</span>. Using Julia version 1.9.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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