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16 Open 6 Closed
16 Open 6 Closed
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Issues list

Use set() instead of [] for var_ids in Solver
#28 opened Jul 14, 2024 by Prunoideae
2
itle: Difficulty Performing SteadyCom Analysis on Genome-Scale Community Model Created with CarveMe
#27 opened May 29, 2024 by wtscott31
4
Transcriptomics usage
#26 opened Feb 15, 2024 by FelipeMelis
4
Adding reactions
#24 opened Dec 21, 2023 by amarsh26
Annotations not properly parsed
#21 opened Oct 9, 2023 by sulheim
Question about loading models
#20 opened Jul 25, 2023 by amarsh26
set_gpr_association does not remove genes
#18 opened Apr 26, 2023 by IdunBurgos
Update package on PyPI
#16 opened Sep 2, 2022 by yaccos
Infeasible or Unbounded in reframed while solvable by cobrapy
#13 opened May 12, 2022 by ccshao
Provide sensible error handling for FVA when original problem is infeasible
#12 opened May 2, 2022 by yaccos
Solver disregards previous set objectives
#11 opened Apr 6, 2022 by yaccos
solver_instance() should keep the objective from the parent model
#10 opened Apr 6, 2022 by yaccos
Declare reframed.solvers.solver.Solver an abstract base class
#9 opened Apr 5, 2022 by yaccos
1
Having class Status in top-level API would be useful
#8 opened Mar 31, 2022 by yaccos
3
essential_genes and essential_reactions extra arguments and outputs
#5 opened Dec 15, 2021 by EmanuelGoncalves
load gene annotations in load_cbmodel()
#4 opened Dec 15, 2021 by EmanuelGoncalves
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